Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01986 ATGCCTCCATCTTCTTCTTCTTCTTCATCTTCTTCTTCTGTTCTAACCACTTCCAATCTCCGTCTTCGCGCCCTAATAATTTGGTCATCCAAGAACTACGCAATCGTCTCATTCGTCTTCCTCCTCCTCTTCTCCCTCACTCTCTTCTCCCATTTGGATTCCCGTTCCCGTTCCCGTTACCCCTCCCATCCACGCTCCACTCTCGTTCCCTTAACCCTCCTCCGTAACGCCAACCGAACGCGCGCGCTTTGCTTGGACGGGAGCGCTCCCGGTTACCATTTCCAAAGCGGCTTCGGATCCGGATCTCGCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAGCGAAAATTAACTCATTTGGGGTCTTCCAATTATATGGAAAAACTTATTCCTTTTTCAGGAATATTGAGCTCTGACCCCTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGCGCATCTTTTGCTGGTCACCCGGAGAGCGAGCGGAGAGGAAGTGGGTTGTTGTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGAGGAACTCTTATCAATTGGCCTATCCAAAGCAAACCAGGCGTTGCTCTCAGGATGCTCTGCTGGTGGGTTAGCAACTCTTATACACTGTGACAACTTCCGACAAGTACTTCCAAAAGAAGCAACTGTGAAGTGCCTTTCTGATGCAGGCTTCTTCCTAGACGAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCATGATGTTGCCCAGCTTCAGGGTCTTGCAAAAAGTTTACACAAAGATTGCATTGCTAAAATGGAACCATATAAGTGTCTCTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATTTTGGTACCTCAAGGATCCGATCCCCTTGGTTACTGGCAAAGCTGCAGACTGAACATTCGCAATTGTAATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTGCTGAAGATTGTGAATGAACTCCAACAACGAAAGGAGATTGGAATGTTTATAAATTCCTGCTTTATCCATTGCCAGACTGAGATGGAAGCAACGTGGCATTCACCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGATCGAGAAGCTGTAAAGCGTATTGACTGCTCTTCTTTTCCGTGCAATCCCACTTGCCACAATATGGATTTCACTTGA 1308 0.4472 MPPSSSSSSSSSSVLTTSNLRLRALIIWSSKNYAIVSFVFLLLFSLTLFSHLDSRSRSRYPSHPRSTLVPLTLLRNANRTRALCLDGSAPGYHFQSGFGSGSRNWLLHIEGGGWCNSIASCTQRKLTHLGSSNYMEKLIPFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESERRGSGLLFRGQVIWEAIMEELLSIGLSKANQALLSGCSAGGLATLIHCDNFRQVLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYHDVAQLQGLAKSLHKDCIAKMEPYKCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGYWQSCRLNIRNCNANMIDKLDGYRGSLLKIVNELQQRKEIGMFINSCFIHCQTEMEATWHSPNSPKINDKTIAESVGDWYFDREAVKRIDCSSFPCNPTCHNMDFT* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01986 435 PANTHER NOTUM-RELATED 42 432 IPR004963 GO:0016787
Lapu1g01986 435 Pfam Pectinacetylesterase 66 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01986 Lapu-Chr1 33443427 33454948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01986 17 400 Carbohydrate Esterase AT3G09410 57.289 3.44e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01986 K19882 - gmx:100792819 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01986 1 33443427 33454948 Lapu1g01986 1 33443427 33454948 ECH