Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01984 ATGGGTAACCGAATCGGCAACCTCTGTCTCTGTTCCTCCGGCGATGCCTCCGGAAGGTTCGAGAACAGAGCTTCCGTCCTCTCCAAGCAACACCAGAATTCCCTCGGAAACTCTATTTGCTATGTGAGACCCGACACGTGTCGGTTCTCCGGCGAGGCGTTTTCCGACGATGATGACACCCTCATGACTTTCCGGTCGGTTTCCGGCGCTACCGTGAGTGCAAACACATCGGCGACCCCTTCAACTTCTCTCGATGATTCTCTTCAACACGGCACCGTTTTGGATTCCTCTGCCTCGTTTGAGAGCTCTGGCTCCTTCACTTCTACCTTGGTACCTTTTCAGCATCAACACGTTCCTCGTGGATTCTCTCTGGGAGGGTGTTCGGAAAGAGGGTTATATTGGGGTCCTCGTGACCGTGTGATGAACGAAGAAGGGTCCGTCGAGAATGGTTCTTCTGAGGTAGCAATGAATAAGGGGAAGGGAAGTAAGAGACATTTGAAAAATGTTCTGAGTAAGATTTCCATTGGGGGAATGTCTATTTTCAAGAAAAATGATAATACGAATGCGAGAGTGAGTTGTAGTACTAGTTTGAGTGCTGAGATGAGTTTGCATGGTGTTGAGGGTGATAACTATTTGGACGGTGATGTGTTGATGGGGTGTGAGAATCTTCATTGGGCTCAAGGGAGAGCTGGTGAGGATCGTTTGCATATTGTGATTTGTGAGGATCATGAATGGGTTTTTGTAGGGATTTATGATGGGTTTAATGGCCCTGATGCCACTGATTTTCTTCTCAACAATTTGTTTTATGCTGTGAATGATGAGCTCAAGGAGATGTTGTGTGGTCACAACAAGTTTGAGCTGAAGGATTCAGAGTCTTTGAAGTTGAAGGAGAACGCGTTGTTTAAGGGAAATGAAGTGGTTGATGGTTGTTGTTCTTCAGGTGAAAATAGAGCAAATTATCCAATAGAAAATGGAGAGTTAAATTTGGAATGTGTGTCAAAAGGAGTAGAGGGAATGGACGCGATAAATAGTGAAAGAGTGGATTTGAGTCACTCAGATGTGCTACAAGCTCTCTCAGAGGCATTGAGGAAGACTGAGGATGCATTCATGAGGACTGCTGAAGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTGATGTTGATGAAGGGTCAAGATGTTTACTTGATGAATGAGGTTTACAGAATCAGGAGGGAGCATCCTGATGACCCTTTAGCAGTAACTAGAGGCCGAGTGAAGGGTCGGTTGAGTGTCACAAGGGCTTTTGGGGCAGGCTTCCTTAAGCAGACTTTCAGAGTGAGCTACATAGGGGAATCTCCATACATCACATGTTTCCCTTCACTGCACCACCACAAGCTCAATCCAAATGACAAGTTCCTCATATTGTCTTCAGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGTTGCCAAAGTAGAGTCATTCATCACCATGTTTCCTGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCACTAGGTCGAGCAGCAAAAAGGGCAGGTTTGGAGTTCCATGAGCTGCTTGATATTCCACAAGGGGAACGCCGTCATTACCATGATGACATTTCTATTGTCATAATCTCCCTAGAGGGAAAAATATGGCGTTCATTGGTGTAA 1680 0.4548 MGNRIGNLCLCSSGDASGRFENRASVLSKQHQNSLGNSICYVRPDTCRFSGEAFSDDDDTLMTFRSVSGATVSANTSATPSTSLDDSLQHGTVLDSSASFESSGSFTSTLVPFQHQHVPRGFSLGGCSERGLYWGPRDRVMNEEGSVENGSSEVAMNKGKGSKRHLKNVLSKISIGGMSIFKKNDNTNARVSCSTSLSAEMSLHGVEGDNYLDGDVLMGCENLHWAQGRAGEDRLHIVICEDHEWVFVGIYDGFNGPDATDFLLNNLFYAVNDELKEMLCGHNKFELKDSESLKLKENALFKGNEVVDGCCSSGENRANYPIENGELNLECVSKGVEGMDAINSERVDLSHSDVLQALSEALRKTEDAFMRTAEEMIGHNPVLAMMGSCVLVMLMKGQDVYLMNEVYRIRREHPDDPLAVTRGRVKGRLSVTRAFGAGFLKQTFRVSYIGESPYITCFPSLHHHKLNPNDKFLILSSDGLYQYFTNEEAVAKVESFITMFPDRDPAQLLIEEALGRAAKRAGLEFHELLDIPQGERRHYHDDISIVIISLEGKIWRSLV* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01984 559 CDD PP2Cc 230 550 IPR001932 -
Lapu1g01984 559 SUPERFAMILY PP2C-like 229 551 IPR036457 -
Lapu1g01984 559 Coils Coil 355 375 - -
Lapu1g01984 559 Gene3D - 404 556 IPR036457 -
Lapu1g01984 559 Gene3D - 192 403 IPR036457 -
Lapu1g01984 559 Pfam Protein phosphatase 2C 392 517 IPR001932 -
Lapu1g01984 559 PANTHER PROTEIN PHOSPHATASE 2C 190 548 IPR015655 GO:0004722|GO:0006470
Lapu1g01984 559 SMART PP2C_4 216 548 IPR001932 -
Lapu1g01984 559 ProSiteProfiles PPM-type phosphatase domain profile. 217 550 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01984 Lapu-Chr1 33432562 33435174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01984 1 559 PP2C-type Phosphatase Gene Family AT2G28890 39.736 1.61e-125 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01984 - K01102 gmx:100794388 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01984 1 33432562 33435174 Lapu1g01984 1 33432562 33435174 ECH