Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01981 ATGGCTGCTACTCCAAAACCCATCAAATCTTTTACCCCTAAGAAACCCTGCGACAACTCAATTTCAGTTTCCAAAGTGAGGGTCATCGTCAGGGTCAGACCCTTCCTCGCACACGAAACCTCAACAAAAAACGGTGACCCTGTTTCTTGCATCTCCGTCTTGGACCAAGATTTCGAGTTTCCGCAGGAAGAGGTTGCTGTTTATCTCAAAGACCCTCAAACCAGCCGGAATGAGTGCTACCAGTTGGACTCGTTCTTTGGGCAAGAAGATAACAATGTGGGACAGATATTCTGCAGAGAAGTGAGCCCCTTGATTCCGGGAATGTTCAGTGGATGCAATGCCACGGTGTTTGCTTATGGGGCTACTGGCAGTGGGAAGACATACACCATGCAGGGAACTGAGGAACAACCTGGTTTGATGTCACTGGCAATGTCTATGATCCTGTCTATTTGCCAGAGCAGTGGCAGCACAGCACAGATCTCATACTATGAGGTCTACATGGACCACTGCTACGACCTTTTGGAGCTCAAAGCGAACGAGATTTCAGTTTGGGATGATAAAGATGGGCAAATTCACCTCCGGGGATTGTCTCAGGTTCCTATAAAGACAATGTCTGAATTTCAAGATGTTTTCTCATGTGGAGTTCAGAGACGCAAAGTTGCCCACACAGGTCTCAATGATGTCTCTAGTAGGAGTCACGGAGTGCTTCTGATATCTGTGTCCACTCCTTCGGCTGATGGCACTGGAACTGTTGTATGCGGAAAGTTGAATCTCATAGACTTGGCAGGTAATGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCAAAGATAAACCAGTCCTTGTTTGCACTATCAAATGTGATATATGCATTGAACAACAATAAACCTAGAGTACCCTACCGAGAAAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGGGGAACAAGTCGTGCACTGATGGTTGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACTGTAAGTTTAGCTGCTCGATCAAGGCATGTCACAAATTTTGTAACTTCAGCTCATAAACAAGAGACCCCAAAAGTTAAAGTTGACATGGAAGCAAAATTGAGAGCTTGGTTAGAATCAAAAGGCAAAACAAAGAGTACACAAAGACTTGGGCCACTAAATTCTCCTCTTCCGAAAAAAACTCCCGTTTCCATCGTTACACCTGCTAAGAGATCCATTACCTTTAACAGTTCAGTGAAGGGCGGAAGAACTGCCACCAACCTAGATACTAAACATACTAATGAAAGGGCCTTTGCTGTGGCTTTTGGAAATTTACTAGATGTTGAAGGTTCATTTGATTCATGCATGGAGAATGATAACAAAGAGACTGAGCATGATGCCAATAAGGCTGCATGGGAATCATACAAAAATTTACCTGCTGAGCCATTGAGAGAGGGAGTAAACTCAATTACTAATGAGAGTAAAGATGCAGCACAAAGTCCTTTAAGAAAAGCCCTCTCCCCCATCAACATCAATGCTAATCAAAAACCCCTTGAGGCATTGTCTTTCACACAAAAACCTTTTCTGGTAACCTGCTCCACTAATAAAGGAATACTAAAGGATAACACTCCACTTGGAAAATTCAGCACACGAAGTTCTACACTGAAGAACTGTCTAGTTCAAGAATACCTTGATTTCTTGAATAATGCTAGCAGAGAGGAACTACTTGAGTTAAAGGGCATAGGAGAGAAAATGGCAGAATACATTATAGACCTCAGAGAAGAAACTCCACTTAAATCGTTAAATGATCTGGAGAAGATAGGCCTCTCTACCAAGCAGGCCCATAACCTGTTCACAAAAGCTGCAAAAAAATTATTTGAAGAAAAAGATGAAGATTCAATACTCAGTTGA 1914 0.43 MAATPKPIKSFTPKKPCDNSISVSKVRVIVRVRPFLAHETSTKNGDPVSCISVLDQDFEFPQEEVAVYLKDPQTSRNECYQLDSFFGQEDNNVGQIFCREVSPLIPGMFSGCNATVFAYGATGSGKTYTMQGTEEQPGLMSLAMSMILSICQSSGSTAQISYYEVYMDHCYDLLELKANEISVWDDKDGQIHLRGLSQVPIKTMSEFQDVFSCGVQRRKVAHTGLNDVSSRSHGVLLISVSTPSADGTGTVVCGKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHVTNFVTSAHKQETPKVKVDMEAKLRAWLESKGKTKSTQRLGPLNSPLPKKTPVSIVTPAKRSITFNSSVKGGRTATNLDTKHTNERAFAVAFGNLLDVEGSFDSCMENDNKETEHDANKAAWESYKNLPAEPLREGVNSITNESKDAAQSPLRKALSPININANQKPLEALSFTQKPFLVTCSTNKGILKDNTPLGKFSTRSSTLKNCLVQEYLDFLNNASREELLELKGIGEKMAEYIIDLREETPLKSLNDLEKIGLSTKQAHNLFTKAAKKLFEEKDEDSILS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01981 637 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 24 481 IPR027640 GO:0003777|GO:0007018
Lapu1g01981 637 ProSitePatterns Kinesin motor domain signature. 254 265 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu1g01981 637 SMART kinesin_4 23 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01981 637 CDD KISc_KID_like 26 350 - -
Lapu1g01981 637 FunFam Kinesin-like protein KIN-10C 554 626 - -
Lapu1g01981 637 Pfam Helix-hairpin-helix motif 568 608 - -
Lapu1g01981 637 SUPERFAMILY RuvA domain 2-like 561 608 IPR010994 -
Lapu1g01981 637 FunFam Kinesin-like protein 22 392 - -
Lapu1g01981 637 Pfam Kinesin motor domain 31 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01981 637 Gene3D Kinesin motor domain 22 392 IPR036961 -
Lapu1g01981 637 Gene3D - 554 625 - -
Lapu1g01981 637 MobiDBLite consensus disorder prediction 384 404 - -
Lapu1g01981 637 PRINTS Kinesin heavy chain signature 255 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01981 637 PRINTS Kinesin heavy chain signature 111 132 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01981 637 PRINTS Kinesin heavy chain signature 223 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01981 637 PRINTS Kinesin heavy chain signature 304 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01981 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 379 IPR027417 -
Lapu1g01981 637 ProSiteProfiles Kinesin motor domain profile. 25 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01981 Lapu-Chr1 33396627 33401208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01981 25 384 Calmodulin-binding Proteins AT5G65930 31.622 2.61e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01981 K10403 - gmx:100804591 1099.35