Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01973 ATGCAAAGATTGGTCATAATGGATCCACGTCTTTGTGGGTTTAGCGGTCCCCCTAATGAAGTCCGGTTAGGAAATCAGAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGAATTTGGTTACCTTCAATCCAATCTAGTGCCTACTAAGACGCCTTCTTCATCCTCGGTTTTTATTCATGAGGAACCTTCTCCGGAAGAATGTGAATTTTCTGATGCAATTTTGAGTTACATCAGTCAGATCCTTATGGAGGAAGACATGGAAGATAAGACATGCATGCTGCATGATTCTTTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTAATAGGTGAAAAGTACCCTTCTTCGCTTTTAGGAAATCCAAGTCCTGTTGATCCAGATGGTGGGGTTGGGGATCATAATTTCTCTGAAAATTATGGTTCTTGTTCTTACAATGATGGTGATCTCAGTAGCATTTTTACTAATGTGCGTCAAAATTTGGGGGAACTTCCTAACCATATTTTACAAGGCAATAGCATCTCACAGTCAACTTGTAGCTCTTCAAATAGTGTGATTAGTAGTGTGGAAGGACCTGTGGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGCGAAAGTCAATCCATTTTGCAATTTCAGAGGGGTGTTGAGGAAGCTAGCAAGTTTCTTCCAACTGGAAATGGGCTCTTCGCTAATTTGGATGTGGCTAATTTTTCAAAACTAGATCCTAAAATGGGAAGTGATGAATTGTCAGTTAAGGTGGAGAAGGATGTGGGGGACTCTTTTCTTGCTGGATCCAAAGGAAGGAAACATCATCTCAGAGAAGAAGGGGATGTTGAAGAAAGTAGAAGCAGCAAGCAAGCTGCAATTTTCTCCGAACCCACATTGCCATCATCTACTATTGATGTAATCCTGCTTCATAGTTTAGGGGATGGTAGGAAGCTTTTTATGGCCCGTCGTGAGGCTTTGCAAGCTAAGAATGATAAGATAGTGCTGTCAAACGGTAAATCAAAGGCTTCCAACGGTGGTAAGGGACGTAGTAAGAAACAAAGTGGGAAAAAGGAAGTGGTTGATTTGAGAACACTTTTGGTTCTTTGTGCACAAGCTGTAGCAGCAGATGACCATAATGGCGCACATGAGTTTCTAAAGCGGATCAGGAAGCACTCAAACCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCGCGCTTGGCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCCTATCATCTGTACCTTGCTGCTTGCCCTTTTAGGAAGATGTCTAGTTTTATCTCTAATGTCACAATAAGGAAATCTTCAGAAAATTCAGCAAGGGTCCATGTCATAGATTTTGGTATCCTTTACGGTTTCCAGTGGCCTACTTTTATTCAGAGACTTTCATTAGCAGTCGGAGGACCACCTAAACTTCGAATTACAGGAATAGACTTCCCACAACCTGGTTTCAGACCTGCTGAGAGAATTGTAGAAACTGGTCGCCGCTTGGCAGCTTATGCTGAATCATTTAAGGTGCCATTTGAGTACAATGCTATAGCAAAAAAGTGGGAAACAATTCAGCTTGAGGAACTAAAGATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTTATCGCGGTAAAAATGTGCTTGATGAATCTGTCCTCGTGGACAGTCCGAGGAACAAATTCCTCAGTTTGATTAGGAAGATCAACCCGGATTTATTCATTCATGGCATTACTAACGGGGCCTTTAATGCGCCTTTCTTTGTTACTCGATTCAGGGAGGCATTGTTTCACTACTCTTCACTATTTGACATGCTTGAAACTATTGTGCCTCAAGAGGACTGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGTAGGGAAGCATTGAATGTCATAGCTTGTGAAGGCTGTGAGAGAGTAGAGAGACCAGAGACGTATAGGCAGTGGCAAGCCCGGATTCTTAGGGCTGGATTTTCGCAACAATCTTTTGAACATGCTTTAGTAAAGAGGACAATGGAGAAAGTATCGACTAGCTACCACAAGGATTTTGTTATTGATGAAGATAGTCAGTGGTTGTTGCAAGGTTGGAAGGGGCGAATTGTTTATGCCCTTTCTTGTTGGAAACCAGCATGA 2211 0.4193 MQRLVIMDPRLCGFSGPPNEVRLGNQRFENGFFDQSREFGYLQSNLVPTKTPSSSSVFIHEEPSPEECEFSDAILSYISQILMEEDMEDKTCMLHDSLDLQIAERSFYEVIGEKYPSSLLGNPSPVDPDGGVGDHNFSENYGSCSYNDGDLSSIFTNVRQNLGELPNHILQGNSISQSTCSSSNSVISSVEGPVDSPSSILQVPDLNSESQSILQFQRGVEEASKFLPTGNGLFANLDVANFSKLDPKMGSDELSVKVEKDVGDSFLAGSKGRKHHLREEGDVEESRSSKQAAIFSEPTLPSSTIDVILLHSLGDGRKLFMARREALQAKNDKIVLSNGKSKASNGGKGRSKKQSGKKEVVDLRTLLVLCAQAVAADDHNGAHEFLKRIRKHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMSSFISNVTIRKSSENSARVHVIDFGILYGFQWPTFIQRLSLAVGGPPKLRITGIDFPQPGFRPAERIVETGRRLAAYAESFKVPFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRGKNVLDESVLVDSPRNKFLSLIRKINPDLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPQEDWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFSQQSFEHALVKRTMEKVSTSYHKDFVIDEDSQWLLQGWKGRIVYALSCWKPA* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01973 736 Pfam GRAS domain family 363 734 IPR005202 -
Lapu1g01973 736 MobiDBLite consensus disorder prediction 337 357 - -
Lapu1g01973 736 MobiDBLite consensus disorder prediction 269 287 - -
Lapu1g01973 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 292 727 IPR005202 -
Lapu1g01973 736 MobiDBLite consensus disorder prediction 269 289 - -
Lapu1g01973 736 ProSiteProfiles GRAS family profile. 354 734 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01973 Lapu-Chr1 33185038 33187982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01973 55 735 GRAS Transcription Factor Family AT2G37650 53.714 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu1g01973 GRAS 7.1e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01973 - - gmx:100801824 1260.74