Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01964 ATGGTCTCTTGGCCTCAAAGCTATAGACAATCTATGGACATGTTAACTAGTGCAACACCTCCTGGACTTACTTTCTTGAAAAGAATTGGTTCAGTAGGGAGAGGTAATTCTCCCATTACATCATTCAAGAGATCTCAATGTCAAGAGGATTCTTCTCTAACTCTACCCCTTGTTTCTGAGACATGTGCATCCAAACAAGAGAATCACCCTGCCTCAGCACCTTGCCTTAAACCACTTGGCAGTGCAAGATTTTCTGTGGACGAATTGCCACCGCCACAACAACAATGTTCAGTAACAAAATCAGTAATTAATGGAACCAATATATTATGTGGCATAGGAATTCTTACCATTCCATATGCAATGAAAAAAGGAGGGTTTCTGAGCCTTATAATACTTTTAATGTTTGCTGTCATGTGTTGTTATACTGGGATGTTATTAATAAGATGCTTAGAAAGCAACCTTGGACTCAAAACCTACCCAGATATTGGCCAGGCTGCTTTTGGAATTGTTGGTCGCTTGGCGATTGCAGCTTCTTGTGTTGAGTATATAATACTAGTCAGTGATAACCTCTCATCACTATATCCTAACACCCATATAAGATTTGGTGGGATTGATTTCCATACTGAACAAATTTTTGCCATCACAGCAGCAATTCTCGTTCTACCAACAGTTTGGTTGCGAAATCTAAGCTTACTTTCTTATATTTCAGTTGGAGGAATATTTGCAACAGTACTTGTTGCACTTTGCTTGTTTTGGGTTGGGACGATGGACCAAGTTGTTGGATATAAGCCAGGAGAAAAAATTTTAGACTTGGCAAACATACCTGTCTCAATTGGTCTCTATAGTTTTTGCTTTGCTGGCCATGCAGTTTTTCCTAACATCTACTCTTCTATGAAGGAACCATCCAAATTCCCATCAGTGTTATATGCCTGCTTTGGCTTTTGCGGTTTCATGTATGTGAGTGTGGGAATAGTGGGCTATTTAACGTTTGGTGACTTAGTTTCTTCTCAATTTACCTTGAACATGCCTAAAGATTTATATGCATCTGACATTGCAGCTTGGACAACGGTTGTGACTCCATTGGCAAAATATGCCTTAACGTTATTGCCTATTGCATTGAGCATAGAGGAACTAGCCACCTCTCCTAGGCTAAGATGTCATGCCATCTCTGTACTTGTCAGAACAGTTTTAGTGATTTTAAGCTTACTTGTGGCTCTCTATATTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTCATGTCAATAGTAGTTGCACTTATTTATCCATGTGCATGTTTTCTCAAGTTACATGGTGGCAGATTATCAAATGTGGAGATAACAAATTGTGTTTTTATAATTGTTGTGGGGCTGATATGCGCATGTATTGGAACATTGTCAGCTGTTTCAAAAATAACTGGCGAAGGAGACTGA 1437 0.3904 MVSWPQSYRQSMDMLTSATPPGLTFLKRIGSVGRGNSPITSFKRSQCQEDSSLTLPLVSETCASKQENHPASAPCLKPLGSARFSVDELPPPQQQCSVTKSVINGTNILCGIGILTIPYAMKKGGFLSLIILLMFAVMCCYTGMLLIRCLESNLGLKTYPDIGQAAFGIVGRLAIAASCVEYIILVSDNLSSLYPNTHIRFGGIDFHTEQIFAITAAILVLPTVWLRNLSLLSYISVGGIFATVLVALCLFWVGTMDQVVGYKPGEKILDLANIPVSIGLYSFCFAGHAVFPNIYSSMKEPSKFPSVLYACFGFCGFMYVSVGIVGYLTFGDLVSSQFTLNMPKDLYASDIAAWTTVVTPLAKYALTLLPIALSIEELATSPRLRCHAISVLVRTVLVILSLLVALYIPYFGSLMALIGSFMSIVVALIYPCACFLKLHGGRLSNVEITNCVFIIVVGLICACIGTLSAVSKITGEGD* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01964 478 PANTHER AMINO ACID TRANSPORTER 91 463 - -
Lapu1g01964 478 Pfam Transmembrane amino acid transporter protein 96 467 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01964 Lapu-Chr1 33066083 33069812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01964 4 476 Amino Acid or Auxin Permease AAAP Family AT5G02180 49.068 3.67e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01964 K15015 - cave:132161847 546.199