Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01956 ATGTTTCTCAAGCTTGTAGTAGTGGTGTCTGTGCTGGCAACAACAGTGGTTGGTGAAGATACCGTCAGTTTCACCTATAATGGGTTCCAGTCTTCATCTCATTTGTATCTTGATGGTGGTGCCGAGTTTACCTCCCGTGGCATGCTCAAACTCACCAACCACACCAAACAACAAAAGGGTCATGCTTTCTTCCCGAGTCCAATAGTCTTCAAGAACTCCTCAAATGCAAGTGCATCTTCTTTCTCCACCACATTTGTGTTTGCCATAAGTTCTGATTATCCGAATTTGAGTGGTCATGGGATTGTTTTTGTGGTTTCTCCAACAAAAGGGCTTCCAAATTCTATGCCAAGCCAGTACCTTGGCCTGTTTGATTACACCAACAATGGCAACACCAGCAACCATGTTTTTGGGGTGGAGCTTGACACTATTATGAACACTGAATTTGGTGATATCAATGACAACCATGTTGGAATTGATGTCAACGAATTGAAGTCGGTTAAATCAGTTGCTGCAGGATACTACAGTGACGGGTTGTTTAAGAGTTTGAGTCTCATCAGTGGCTACCCAATGCAGTTATGGGTGGAATATGACGGCCCAAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAACATTGGCAAACCAGAAAGCCCCTTGTTATCTTTGAGCAAAGATCTTTCTCCAATTCTTAACAATAACATGTATGTTGGGTTCTCATCCTCAACAGGGTCACTTCAAAGTTCTCATTATGTTTTGGGTTGGAGCTTTAAGGTGAATGGCCAGGCTCAACAACTTGCCATCTCTGAACTCCCAAAGCTACCTAGACTAGGCAGTAAAGAAGAGTCTAAGGTTCTTATTGTTGGGTTGCCTCTCATATCACTCAGTTTGGTTATCATGGTGGTTCTTGCAGTGATTCATGTCATCAAAAGGAAGAAGTTCACGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAAGATCTTAGCCAGGCAACAAAGGGGTTCAGGGAGAAGGAGCTATTGGGAAGTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAATTTCAAAAATTGAGGTTGCAGTGAAGAAGGTGTCCCATGAATCAAGACAGGGGATGAGAGAATTTGTGGCAGAAATTGTTAGCATTGGCCGTCTTAGGCACAGGAATTTGGTTCCCCTTCTGGGGTATTGCAGGCGCAAAGGAGAGTTGCTATTGGTCTACGACTACATGCCAAATGGAAGCCTAGACAAGTATCTCTACAACAAACCAAGAGTGACCCTGAATTGGAGCCAGAGATTTAGAATCACCAAGGGGGTTGCTTCAGGTCTGTTTTATCTACATGAGGAATGGGAGCAAGTTGTTGTCCACAGAGACATTAAGGCTAGTAATGTGCTACTTGATGCCGAATTGAATGGTAGATTAGGGGACTTTGGCCTTTCAAGGTTGTATGAGCATGGAACTGACCCTCACACTACTCATGTGGTCGGAACACTAGGGTATCTAGCACCAGAGCACACTAGAACAGGTAAGGCCACTACAAACTCTGATGTGTTTGCTTTTGGTGCATTTATGTTAGAGGTTGTTTGTGGAAGAAGGCCAATAGAGCAAGTGGGGGGGTCTGGGAGTGAAATTCTGGTTGACTGGGTGTATAATTGTTGGAAAAGAGGTGAGATTCTTGAGGCAAGGGATCCAAACTTAGGCACAAATTATCGGCATGAGGAAGTGGAGTTGGTGTTGAAACTAGCTTTGATGTGCTCACATTCCGATCCTTTGGCTAGGCCAAGCATGCGCCAAGTTGTGCGGTACTTGGAGAGGGATGTTCCTCTTCCAGACATGTCTTTGCTTAGCTTATCTTCCACTGGCTTAGCTTTTGGTCTGCATGAAGACTTTCAGGATTGTCCAATGTCTTATCCTTCATCCATGGATAGGCCAATCTCCCATACTTCTTCAATTGCTGAATCACTTCTCTCTGGGGGTCGTTGA 2007 0.4434 MFLKLVVVVSVLATTVVGEDTVSFTYNGFQSSSHLYLDGGAEFTSRGMLKLTNHTKQQKGHAFFPSPIVFKNSSNASASSFSTTFVFAISSDYPNLSGHGIVFVVSPTKGLPNSMPSQYLGLFDYTNNGNTSNHVFGVELDTIMNTEFGDINDNHVGIDVNELKSVKSVAAGYYSDGLFKSLSLISGYPMQLWVEYDGPKKQIDVTLAPINIGKPESPLLSLSKDLSPILNNNMYVGFSSSTGSLQSSHYVLGWSFKVNGQAQQLAISELPKLPRLGSKEESKVLIVGLPLISLSLVIMVVLAVIHVIKRKKFTELLEDWEQDYGPHRFKYKDLSQATKGFREKELLGSGGFGRVYKGVMPISKIEVAVKKVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNKPRVTLNWSQRFRITKGVASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLSRLYEHGTDPHTTHVVGTLGYLAPEHTRTGKATTNSDVFAFGAFMLEVVCGRRPIEQVGGSGSEILVDWVYNCWKRGEILEARDPNLGTNYRHEEVELVLKLALMCSHSDPLARPSMRQVVRYLERDVPLPDMSLLSLSSTGLAFGLHEDFQDCPMSYPSSMDRPISHTSSIAESLLSGGR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01956 668 FunFam L-type lectin-domain containing receptor kinase V.9 21 263 - -
Lapu1g01956 668 FunFam Lectin-domain containing receptor kinase A4.3 326 417 - -
Lapu1g01956 668 CDD lectin_legume_LecRK_Arcelin_ConA 22 260 IPR001220 GO:0030246
Lapu1g01956 668 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01956 668 ProSiteProfiles Protein kinase domain profile. 341 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01956 668 Pfam Legume lectin domain 22 271 IPR001220 GO:0030246
Lapu1g01956 668 Pfam Protein kinase domain 341 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01956 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 277 IPR013320 -
Lapu1g01956 668 CDD STKc_IRAK 347 613 - -
Lapu1g01956 668 Gene3D - 19 272 - -
Lapu1g01956 668 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Lapu1g01956 668 FunFam L-type lectin-domain containing receptor kinase S.4 418 624 - -
Lapu1g01956 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lapu1g01956 668 SUPERFAMILY Protein kinase-like (PK-like) 322 622 IPR011009 -
Lapu1g01956 668 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Lapu1g01956 668 PANTHER - 38 616 - -
Lapu1g01956 668 Gene3D Transferase(Phosphotransferase) domain 1 418 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01956 Lapu-Chr1 32980292 32982836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01956 21 668 Receptor kinase-like Gene Family AT2G37710 63.344 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu1g01956 Pkinase 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01956 - - gmx:100783815 1146.72