Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01940 ATGGAAGCCACTTCCATAACGCCGTTGTTGAAGGGCTTTTGTGATCACACACAATGGAAATATGCTGTTTTTTGGAAGCTTGATCACCGTCTTCCTATGAATTTGACCTGGGAAAATGGTTACCAGAAAGGAAATGAGGTTGAGGAAAGTATGTGGGATGACGTCAATTTCAAATCCCCAGATGAGTTATATTCTTCAAGAGGTGAAAGTACTGATTATTCAGGAGATTATTCAGTTCGACTACTCATGATTGAAATGTCTCATCGTAAATACAATTTGGGAGAAGGGGTTGTTGGCAAAGTAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAGGATGTTCTTACCAGTAAGTTTGACACTGATTTAATTTCTGAGTGTCCTGATGAGTGGCTTCTTCAAATTGCATGTGGCATCAAGACTATTGTGCTGGTGCCGGTTCTTCCACTAGGGGTTTTGCAGTTTGGTTCATTTGAAGAGGTTGCTGAAGACCTGGAATTTGTTTCCAATGTGAAAGATAAGCTCCAATACATTGATTGCTTGGAAACAAATATTACCCCCTTGAACATGGGAACTGATTATCAAGATTGGTCATTCTCAGACCTAATGCATAATTTAATGGATAGCTTGGACGAATCATCTTCTGTTACTAAAACCATATTGAAAAGTGAAGTTTCAACCAGTACTGCTTCGCACAGTGCAAATGGTTCAACAAGGCTGAACCCAACAATGCTATCATTTATTCAAGATGACTGTTGTGTGTCTAGACAAAATCTACTAAAATCTCTGAAAAGAGAAAATGTAAATGAGATAGGTTCCTCATCAACTGATATGTCAACTGTTCCTAGACATATTGGTAAGATGGAGACAAAACCAAATCACACGGAAGAAGAGATGTGGTCCTGGTCAGTTTTTGAAGAGATGTCAAATGGATTGGACTCTTTCTCTGTTAAAAATATGACAGAGAAACAGTTTGGAGGCACTGAAAGTGGTTATAACGATTCTAAGAATATGAATGACTTCACTTTTCCCTCCGAGTCAGAATTGCACAAAGCACTTGGATCAGTTGCATACTCTGTTGGTGATACGTACAATACTTCATGTTTGATGACCAATAAAAAAGAAAAAGATCATCTTAAAGGTTTTGAGTTTCTCGAAGATCTTGATCCAGAATATCTTTTAGATGCTGTAGTTGGCAATTTATGCAGTGCTGCGGATGATACTTCTAGTTTTTCGAACAGTATCAGGTCTCTTACAGCTATGCCAACAGGGATTAGTGGTTCCATTCAGCCAAAAAATAATTTAGAAGAAAGCAGCTCTTTGATTGTGGATAATTCAGATGTGAAAAATGATCCTGTGCCTGCGATTACCATGAAGAGAAAATATGAATTTTCTAACCATTTTACATCCTCTTTGGGTGGAAATGGAAGCTTATTGACTGATGAGGTGCAACAGGAAGAGCAAGATGGTCATATGCTGCCTATTAGTGAACCAAAGCTCTCTTGCACACACAAGAAAAGAACAAGAGTTGCTAACAACCAAAAGGCAAGGCCAAGAGATAGACAGCTTATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGAAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTGTACTTGAGAAAGATAACAAGTCAGGCTGAGAAACTGAAACGATTTGCCAATCGGGCGGTTGCTGAGAGCAAAAGACAGAAAATCAACGGTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTAGCATGGCCTATAGTCATAGAAGATCTGGAATGCGCAGGGCACATGCTCATTGAGATGGTATGCAATGAGCATGGGCTTTTCTTGGAGATTGCTCAGGTCATCCGGAAGCTGGATGTCACCATCTTGAAAGGGATCCTGGAAAACCGTTCTAGCAACAGCTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTCTATGTCCATTACTGCATCTTCTGCAGCTTAGGAGAAACCCTATCTCGTACAAAAGCTGA 2073 0.4057 MEATSITPLLKGFCDHTQWKYAVFWKLDHRLPMNLTWENGYQKGNEVEESMWDDVNFKSPDELYSSRGESTDYSGDYSVRLLMIEMSHRKYNLGEGVVGKVALARDHCWVSCEDVLTSKFDTDLISECPDEWLLQIACGIKTIVLVPVLPLGVLQFGSFEEVAEDLEFVSNVKDKLQYIDCLETNITPLNMGTDYQDWSFSDLMHNLMDSLDESSSVTKTILKSEVSTSTASHSANGSTRLNPTMLSFIQDDCCVSRQNLLKSLKRENVNEIGSSSTDMSTVPRHIGKMETKPNHTEEEMWSWSVFEEMSNGLDSFSVKNMTEKQFGGTESGYNDSKNMNDFTFPSESELHKALGSVAYSVGDTYNTSCLMTNKKEKDHLKGFEFLEDLDPEYLLDAVVGNLCSAADDTSSFSNSIRSLTAMPTGISGSIQPKNNLEESSSLIVDNSDVKNDPVPAITMKRKYEFSNHFTSSLGGNGSLLTDEVQQEEQDGHMLPISEPKLSCTHKKRTRVANNQKARPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRFANRAVAESKRQKINGSHPGRSCAFDFESELAWPIVIEDLECAGHMLIEMVCNEHGLFLEIAQVIRKLDVTILKGILENRSSNSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPISYKS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01940 690 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 509 558 IPR011598 GO:0046983
Lapu1g01940 690 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 274 685 IPR043561 GO:0003700|GO:0006355
Lapu1g01940 690 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 174 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01940 Lapu-Chr1 32779488 32786198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01940 322 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.709 2.96e-49 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01940 - - gmx:100820605 1053.12