Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01925 ATGGCTGAGGGTTTTGAGCATTACCATGTCCCACAACAAAGTAGGAGGGACAAGCTAAGAGTTTTCGCTCAGAACCAACCTACTTTCGTTGAATCTTCCTCTATCCTTCACCCCACTTGTCCAACTTTAACTTCTCTCTACGATCCTTCGCTTATTCCCTCTGATTTGTTAGCTTGTGCCACCCAACAGGGTACTGCTGCTAAGGAAGAAGGTTCCAATTTGATGATGGGGTTTGTGGAAGGAGGGGTTGTGAATGATGATGCAATCCATGTTATCAACAGTAATAGCAACCATCATAACAACAACCCTTTTCTCTATCAGCTTCAGAACCTTAGGGAATTTGGTGATGGCTACAATGATGCGAGTGAAATGATGGTGTTCAAGCCTGAGCCTTTGTCTTTGTCTTTGTCTTCCCAGAGTAACAACACTCATCACCCTTTGGAACTGAATCTTCAGCGATTTGGGGCTGTTATTCCAGGTTTGGTTGGAAGGAACAGTGAGGTTTCGAGGAATTCGGTTCCACTTGGACCCTTTACGGGTTATGCTTCGATATTGAAGGGATCGAGGTTCTTGAAACCTGCACAGCAATTATTGGAAGATCTATGTGATGGTGGAGTTCGTGGAATTTACGCTACCGAGAAGACTATTGCTCCTGATGCATCGTTGATGGAGCCTCCTCATGAGGGTTTGAGTGCTAGTGGAGCTAGTGGTGGGGATGATGCACTTGGGGAATATGAGAATGAGAGTAGGAAGAAGAAGTGTAGATTATTAACCATGCTTGACGAGGTTTATAGGAGGTACAGGCAGTATTATCAACAGATGCATGCAGTGATAACTTCATTTGAGTATGTTTCTGGTCTTGGTAATGCAGCCCCATATGCAGGTTTGGCTATAAATGCCATGTCTAAACATTTTAAATGCTTGAAGAATGTTATCACTGACCAGCTTCAGTTCATCAACAAGGCTCCTTTTCAGATTAGTAACAGAAAGGATGAATCTCCAAGGTTTCACAACAGTGATAGGAGCACTTACAGCCAAAGGACAGGGTTTCTTGAGCACCAACAACCAGTTTGGCGACCTCAAAGAGGACTTCCTGAGCGTGCTGTCAGTGTTCTCAGGGCCTGGTTGTTTGAACACTTTCTTCACCCTTATCCTACTGATACCGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGCAACCAGGTGTCTAATTGGTTTATTAATGCAAGAGTAAGGCTTTGGAAGCCAATGGTGGAAGAAATACATATGCTAGAATCACAGCAAGCTCAAAAAAGGCCACAGAGGGAAGATCAAAGTAGGAGAAACTTGAGTGTTGATCATTTACCTTCAGACAACTCTCTTGTTATGGAGAATCCATCTACCTCCATGGAGAAGTTTCAGGATACCCCTTATAAACAACACAGAAATGAAATTGGTAATATGCAAGTGAGGGGTCAGGAACAGCTGAATCAAACTAACACAAGCAATCAGCAAGTGGGTGTTGGAGTGAGCATGGGGAGTGGTGGTGGTGGGGCAAGCAATAATAATGGTGTGTCTCTCACACTTGGTCTTCATCAAAATCATGGTATTGGGTTGTCTGAGCCCTTTGGCATGAGTGCAGCTCAACGTTTTGGTGTTGCCCTTCAACCTGAGGGCTATGTTATAAGTGGTTTTGAATCACAAAATCGACATTTTGGAAGAGATGTTATTGGGGGAGGGCAACTGTTGCATGATTTTGTAGGCTGA 1752 0.4378 MAEGFEHYHVPQQSRRDKLRVFAQNQPTFVESSSILHPTCPTLTSLYDPSLIPSDLLACATQQGTAAKEEGSNLMMGFVEGGVVNDDAIHVINSNSNHHNNNPFLYQLQNLREFGDGYNDASEMMVFKPEPLSLSLSSQSNNTHHPLELNLQRFGAVIPGLVGRNSEVSRNSVPLGPFTGYASILKGSRFLKPAQQLLEDLCDGGVRGIYATEKTIAPDASLMEPPHEGLSASGASGGDDALGEYENESRKKKCRLLTMLDEVYRRYRQYYQQMHAVITSFEYVSGLGNAAPYAGLAINAMSKHFKCLKNVITDQLQFINKAPFQISNRKDESPRFHNSDRSTYSQRTGFLEHQQPVWRPQRGLPERAVSVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQAQKRPQREDQSRRNLSVDHLPSDNSLVMENPSTSMEKFQDTPYKQHRNEIGNMQVRGQEQLNQTNTSNQQVGVGVSMGSGGGGASNNNGVSLTLGLHQNHGIGLSEPFGMSAAQRFGVALQPEGYVISGFESQNRHFGRDVIGGGQLLHDFVG* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01925 583 CDD homeodomain 358 419 IPR001356 GO:0003677
Lapu1g01925 583 MobiDBLite consensus disorder prediction 447 468 - -
Lapu1g01925 583 Pfam Associated with HOX 184 313 IPR006563 -
Lapu1g01925 583 SUPERFAMILY Homeodomain-like 360 425 IPR009057 -
Lapu1g01925 583 FunFam BEL1-like homeodomain protein 9 361 423 - -
Lapu1g01925 583 Pfam Homeobox KN domain 375 414 IPR008422 GO:0003677|GO:0006355
Lapu1g01925 583 MobiDBLite consensus disorder prediction 427 446 - -
Lapu1g01925 583 SMART prehox3 179 314 IPR006563 -
Lapu1g01925 583 MobiDBLite consensus disorder prediction 427 468 - -
Lapu1g01925 583 MobiDBLite consensus disorder prediction 221 242 - -
Lapu1g01925 583 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 103 438 - -
Lapu1g01925 583 ProSiteProfiles 'Homeobox' domain profile. 355 418 IPR001356 GO:0003677
Lapu1g01925 583 SMART HOX_1 358 422 IPR001356 GO:0003677
Lapu1g01925 583 Gene3D - 361 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01925 Lapu-Chr1 32580424 32586742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01925 1 583 Homeobox Transcription Factor Family AT5G02030 45.543 3.74e-129 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lapu1g01925 POX 2.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01925 - - vun:114185080 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01925 1 32580424 32586742 Lapu1g01925 1 32580424 32586742 ECH