Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01920 ATGGCTACAAATCAGGAAGAGGTGAAGGTCTTGGGAGTTTTGGGAAGCCCGTTCGTGTGTAGGGTTCTGATTGCTCTCAAATTGAAGGGAGTTGAATACAAATTTTTGGAAGAAGATTTGGCTAACAAGAGTGATCTGCTTCTCAAATACAACCCAGTTCACAAGAAGGTTCCAGTTTTTGTTCACAATGAAAAGCCCATTGCAGAGTCTCTAGTGATTGTTGAGTACATTGATGAGACATGGAACAACAACCCCATCTTGCCTTCTGATCCTTATCAGAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATTGATGACAAGATTGTGGGTGCTGCATTTAAATCTGTTTTCACTGTTGATGAGAAAGAGAGGGAGAAGAATGTGCAAGAAACATTGGAGGGTCTGCAGTTTCTTGAGGATGAGATAAAGGAGAAGAAATTCTTTGGAGGAGAGGAGATTGGGTTGGTGGATATTGCTGGTGTCTTCATAGCATTTTGGTTTCCAATTGTTCAGGAAATAGCAGGGTTGCAGATATTCACCAGTGAGAAACTTCCTAATCTCTACGACTGGAGCCAAAAGTTCATCGACCACTCTGTTGTGAAGGAAGCTCTTCCTCCTAGGGAACCACTTTTTGCCTTCTTCAAAGCCCGCTATGAAAGCCTTACTGCCTCCAAATAG 678 0.4292 MATNQEEVKVLGVLGSPFVCRVLIALKLKGVEYKFLEEDLANKSDLLLKYNPVHKKVPVFVHNEKPIAESLVIVEYIDETWNNNPILPSDPYQRALARFWSKFIDDKIVGAAFKSVFTVDEKEREKNVQETLEGLQFLEDEIKEKKFFGGEEIGLVDIAGVFIAFWFPIVQEIAGLQIFTSEKLPNLYDWSQKFIDHSVVKEALPPREPLFAFFKARYESLTASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01920 225 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Lapu1g01920 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Lapu1g01920 225 FunFam Glutathione S-transferase GSTU6 3 87 - -
Lapu1g01920 225 SFLD Main (cytGST) 4 223 - -
Lapu1g01920 225 CDD GST_N_Tau 8 81 - -
Lapu1g01920 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lapu1g01920 225 FunFam Tau class glutathione S-transferase 87 224 - -
Lapu1g01920 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Lapu1g01920 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lapu1g01920 225 Gene3D - 90 225 - -
Lapu1g01920 225 Pfam Glutathione S-transferase, C-terminal domain 118 195 IPR004046 -
Lapu1g01920 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Lapu1g01920 225 Gene3D Glutaredoxin 1 89 - -
Lapu1g01920 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 208 IPR045073 -
Lapu1g01920 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01920 Lapu-Chr1 32493286 32494735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01920 4 224 Glutathione S-transferase Gene Family AT3G09270 54.018 6.92e-82 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01920 K00799 - gmx:100806714 378.252