Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01917 ATGGGTTCCGGTCAGGAAGAGGTGACCCTTTTGGGGATTATGGGAAGTCCATTTGTTTGCAGGGTGAAGATAGCCCTAAAGTTGAAGGGAGTTGAATACAAATATGTGGAAGAAAATTTGGGCAACAAGGGTGAACTGCTTCTCAGATACAACCCGGTTCACAAGAAAATTCCAGTCTTTGTTCACAATGGGAAACCCATTGCAGAATCTCTTTTGATTGTTGAATACATCGATGAGACATGGAATATCAACCCCATCTTGCCTTCTCACCCTTACCAGAGAGCCCTGGCTCGTTTCTGGTCCAAATTCTGTGATTCATGA 321 0.4393 MGSGQEEVTLLGIMGSPFVCRVKIALKLKGVEYKYVEENLGNKGELLLRYNPVHKKIPVFVHNGKPIAESLLIVEYIDETWNINPILPSHPYQRALARFWSKFCDS* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01917 106 Gene3D Glutaredoxin 1 85 - -
Lapu1g01917 106 FunFam Tau class glutathione S-transferase 1 89 - -
Lapu1g01917 106 SFLD Main (cytGST) 8 106 - -
Lapu1g01917 106 CDD GST_N_Tau 8 81 - -
Lapu1g01917 106 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lapu1g01917 106 SFLD Glutathione Transferase (cytosolic) 8 106 IPR040079 -
Lapu1g01917 106 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 105 IPR045073 -
Lapu1g01917 106 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lapu1g01917 106 Gene3D - 86 106 - -
Lapu1g01917 106 SUPERFAMILY Thioredoxin-like 8 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01917 Lapu-Chr1 32480169 32480910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01917 3 105 Glutathione S-transferase Gene Family AT2G29420 65.049 6.05e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01917 K00799 - gmx:100500052 179.874