Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01913 ATGTATATGTCTCCAGACCAAGACATGCCTTCCATGTCTAATGACACAAACAATGTGAAGAGCATGATGCAGATGAGTTTCTACTGGGGCAAAGATGCCATAGTGCTTTTCCCGGGGTGGCCTAATAACAACGTTGGCATGTACATCTTAGCCATCATATTTGTGTTTTTATTAGCCATGGCTATTGAGGTTTTATCAAACCAACCACTCATTAAACCTGGGACAAGTCCCTTTCTGGGAGGACTCATTCAAGCTATTGTTCACTTTTTTCGCATCAGCTTCGTTTACATGGTGATGCTTGCTGTCATGTCCTTCAATGGGGGAATATTCATAGCTGCTGTGGTAGGCCACACCTTGGGATTCTTCGTTGCCAAGTCTCGTGCTCTTGCCCTCGCCAATAGGGAAGAAGACAAAGGGCCTTCCTCCGTTAGAAACAATGTTTGA 444 0.4459 MYMSPDQDMPSMSNDTNNVKSMMQMSFYWGKDAIVLFPGWPNNNVGMYILAIIFVFLLAMAIEVLSNQPLIKPGTSPFLGGLIQAIVHFFRISFVYMVMLAVMSFNGGIFIAAVVGHTLGFFVAKSRALALANREEDKGPSSVRNNV* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01913 147 Pfam Ctr copper transporter family 78 123 IPR007274 GO:0005375|GO:0016020|GO:0035434
Lapu1g01913 147 Pfam Ctr copper transporter family 25 66 IPR007274 GO:0005375|GO:0016020|GO:0035434
Lapu1g01913 147 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 16 137 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01913 Lapu-Chr1 32397989 32398447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01913 22 129 Inorganic Solute Cotransporters AT5G59040 45.370 4.65e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01913 K14686 - gmx:100527849 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01913 1 32397989 32398447 Lapu1g01913 1 32397989 32398447 ECH