Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01859 ATGGTGTTCACATTTCCAACGCTTCAGTCCATGAAGCTCCTCTCATTATGGCTGCTACTAGTTGTAATGGCCACTTCTCTGCATGCACCATTCTCTTCCTCACTCTCACTTCAACACACACAAGCAAACGCTTTGTTGAAGTGGAAAGCAAGCCTTGACAACCCAACTCAAACATTACTATCTTCATGGGGTGGCAATAGTTCTTGCAATTGGCTTGGAATTGCTTGTGACCACTCAGGATCAGTCTCCAACATTAATCTTACAAACATTGGATTAAGTGGTACACTTCAAACTCTCAATTTTTCATCATTTCCAAACCTCCTCACTCTAGACATGAGTTTGAACTCCTTGAGTGGAAGTATTCCTCCTCAAATTGGGATATTGTCCAAACTCACTCATCTTGATTTGAGTGACAATCATCTCACTGGACCAATTCCTTCTGAAATAACTAAGCTGGTCAGTCTTCACATTTTATATTTGAAAAATAATGTTTTCAATAGTTCTATTCCTGAAGAAATAGGTGCATTAAGGAATTTGAGAGAGATTACCATTCGATTTGCCAATCTCACAGGGACAATCCCAAATTCTATTGGAAAGCTATCATTCTTGTCTAATCTTTATTTACGGGATTGTAGTCTCACAGGGTCTATTCCAAAATCTATAGGAAATTTGACTCGTTTGTTATTTCTAGATTTTTCGCAGAACAACCTTTATGGACATATTCCTCACGAAATTGGGAATTTGTCAAACTTAAAGACTTTGGGGCTTGGAAATAATTACTTACATGGTTCTATTCCTCAAGAAATTGAAATGATGACAAATTTGTTGCAACTTGATTTGTCTGATAACTTTTTGTCAGGAACAATCCCCCCTACAATTGGAAATCTGAGCCACTTAGTCTTTTTCTACATGTATGACAACCATTTATCTGGATCTATTCCTAATGAAATGGGAAAACTTCATTTTCTTCTGACGATCCAATTGTCAAACAATAATCTTTCTGGGTCAATCCCATCTTCCATCGGTAACTTGGTCAATTTGGAATCTATTCTCCTTGATAGAAACAAACTCTCTGGAACAATTCCTTCGACTATTGGTAACTTGAAAAAGCTCACCACCCTTGTTTTATTCTCAAATAAGTTGAGTGGATACATGCCAATAGAAATGAATATGCTTAACAACTTGGAAACATTGAATTTATGTGACAATAATTTCATTGGTCATTTGCCTCGTAATGTTTGCATTAGTGGAAAGTTGATAAAGTTTACTGCTAGCAATAACAATTTCACAGGTCGAGTACCCAAGAGTTTGAAGAATTGCTCCAGCCTCATAAGAGTTTCACTTCGACAAAACCATTTGACAGGAAATGTAACAGAGGATTTTGGTGTGTATCCAAACTTGGATTACATAGACCTTAGAAGCATTCCACCAAAACTAAGTCAAGCAGCCAATTTACAAGTAATTCAACTGTCTTCAAATCACCTCGCAGGAGTCATTCCTAAAGATTTAGGTAATTTGACCTACTTGTTCAAACTCTCTCTCGATAATAATAATCTTTCAGGGAATGTTCCTATAAAAATAACATCATTGCAAGATCTTGACACCTTAGAGCTCGGCGCAAATAGTTTTTCTGGCGTAATTCCAAATCAACTTGGCAATTTGGTGAAGTTATTACATTTGAATTTGAGCCAAAATAAATTTATGGAAAATATTCCATCCGAGTTTGGTAAATTAAAATATCTTGAAAGTCTTGATCTTAGCATGAATTTTTTGAGTGGAAAAATACCACCAGTGCTGGGAGAGTTGAAAAGCTTAGAAACATTAAATCTCTCGCACAATCAGCTTTCAGGCGATCTCTCCAGCCTTGATGAGATGAGAAGCCTGACATCTGTTGATATATCTTACAACCAATTACAGGGTCCACTTCCAAACATCTCAGCCTTCAATATGGCCACATTTGAAACATTGAGAAACAATAAAGGCTTGTGTGGTAATGTCTCTGGCTTGGAACCATGTCCAACATCACGTAACAAATCTAAAAAGCGTAAGACTAACAGAGTTATATTGGTGTTTTTACCGATTGGTTTGGGCACTTTAATGCTAGCATTATTTGTCTTTGGAGTCTCTTATCATATTTGTCGAAGCTCAAAGACAAAAGAACATCCAGATACTGAATCTTTAGGCCAAAATCTTTTTACGATATGGAGTTTTGATGGAAAGATGGTGTATGAGAACATAATTGAAGCCACAGAAGACTTTGACGATAAACATCTAATTGGAGTTGGAGGACAAGGAAGTGTTTATAAAGCTGAATTGCAAACAAATCAAATTGTTGCTGTTAAGAAACTCCATTCAGTACAAAATGAAGAAATGTCCAATGCTAAAGCTTTCACAAGTGAAATTCAAGCTTTGACAGAGATTAGACATCGTAACATTGTGAGGTTATATGGGTATTGTTCTCATTCCCGATTCTCATTTTTGGTGTATGAGTTCCTAGAGAAGGGAAGCATGGAACAGATTTTAAAAGATGATGAACAAGCAATTGCATTTAATTGGAATAGAAGGATTGATGCCATTAAAGGTGTAGCAAATGCTTTATGCTATATCCATCATGATTGTTCACCTCCAATTGCTCATCGAGATATATCAAGCAAGAATGTTCTTTTGAATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAGCTTCTTAATCTTAATTCAACCAATTGGACCTCATTCGTTGGAACTTTTGGATATGCTCCTCCAGAACTTGCGTATACAATGGAAGTAAATGAGAAATGTGATGTGTACAGCTTTGGGGTATTGACATTAGAAATACTTTTTGGAGAACACCCTAGAGATTTTGTAACTTCGTTATTGTCTTCACCAAATGTCATGGACTCAACATTGGATATTCCTTCATTGATGGGTAAGTTAGATCAACGTCTACCAATTCCTCCAAAACCTATTACTAAGGAGATAGTTTTGATTGTAAGGATAGCACATGCTTGCTTGGCTGAAAGCCCTCGTTCTCGTCCTACCATGGAGCAAGTTGTCAAGGATTTTGGAATTTAG 3084 0.3674 MVFTFPTLQSMKLLSLWLLLVVMATSLHAPFSSSLSLQHTQANALLKWKASLDNPTQTLLSSWGGNSSCNWLGIACDHSGSVSNINLTNIGLSGTLQTLNFSSFPNLLTLDMSLNSLSGSIPPQIGILSKLTHLDLSDNHLTGPIPSEITKLVSLHILYLKNNVFNSSIPEEIGALRNLREITIRFANLTGTIPNSIGKLSFLSNLYLRDCSLTGSIPKSIGNLTRLLFLDFSQNNLYGHIPHEIGNLSNLKTLGLGNNYLHGSIPQEIEMMTNLLQLDLSDNFLSGTIPPTIGNLSHLVFFYMYDNHLSGSIPNEMGKLHFLLTIQLSNNNLSGSIPSSIGNLVNLESILLDRNKLSGTIPSTIGNLKKLTTLVLFSNKLSGYMPIEMNMLNNLETLNLCDNNFIGHLPRNVCISGKLIKFTASNNNFTGRVPKSLKNCSSLIRVSLRQNHLTGNVTEDFGVYPNLDYIDLRSIPPKLSQAANLQVIQLSSNHLAGVIPKDLGNLTYLFKLSLDNNNLSGNVPIKITSLQDLDTLELGANSFSGVIPNQLGNLVKLLHLNLSQNKFMENIPSEFGKLKYLESLDLSMNFLSGKIPPVLGELKSLETLNLSHNQLSGDLSSLDEMRSLTSVDISYNQLQGPLPNISAFNMATFETLRNNKGLCGNVSGLEPCPTSRNKSKKRKTNRVILVFLPIGLGTLMLALFVFGVSYHICRSSKTKEHPDTESLGQNLFTIWSFDGKMVYENIIEATEDFDDKHLIGVGGQGSVYKAELQTNQIVAVKKLHSVQNEEMSNAKAFTSEIQALTEIRHRNIVRLYGYCSHSRFSFLVYEFLEKGSMEQILKDDEQAIAFNWNRRIDAIKGVANALCYIHHDCSPPIAHRDISSKNVLLNLEYVAHVSDFGTAKLLNLNSTNWTSFVGTFGYAPPELAYTMEVNEKCDVYSFGVLTLEILFGEHPRDFVTSLLSSPNVMDSTLDIPSLMGKLDQRLPIPPKPITKEIVLIVRIAHACLAESPRSRPTMEQVVKDFGI* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01859 1027 Gene3D Ribonuclease Inhibitor 390 675 IPR032675 -
Lapu1g01859 1027 SUPERFAMILY RNI-like 278 654 - -
Lapu1g01859 1027 ProSiteProfiles Protein kinase domain profile. 753 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01859 1027 FunFam MDIS1-interacting receptor like kinase 2 832 1027 - -
Lapu1g01859 1027 SUPERFAMILY Protein kinase-like (PK-like) 737 1024 IPR011009 -
Lapu1g01859 1027 Gene3D Ribonuclease Inhibitor 290 389 IPR032675 -
Lapu1g01859 1027 SMART LRR_typ_2 128 151 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 392 416 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 554 578 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 272 296 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 602 625 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 344 368 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 152 176 IPR003591 -
Lapu1g01859 1027 SMART LRR_typ_2 224 248 IPR003591 -
Lapu1g01859 1027 Gene3D Ribonuclease Inhibitor 187 289 IPR032675 -
Lapu1g01859 1027 Pfam Leucine Rich Repeat 130 151 IPR001611 GO:0005515
Lapu1g01859 1027 SUPERFAMILY L domain-like 41 314 - -
Lapu1g01859 1027 Pfam Leucine Rich repeats (2 copies) 603 643 IPR025875 -
Lapu1g01859 1027 Gene3D Transferase(Phosphotransferase) domain 1 832 1026 - -
Lapu1g01859 1027 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 292 1025 - -
Lapu1g01859 1027 FunFam Nuclear pore complex protein NUP107 38 195 - -
Lapu1g01859 1027 SMART LRR_sd22_2 602 624 - -
Lapu1g01859 1027 SMART LRR_sd22_2 128 151 - -
Lapu1g01859 1027 SMART LRR_sd22_2 554 573 - -
Lapu1g01859 1027 SMART LRR_sd22_2 272 298 - -
Lapu1g01859 1027 SMART LRR_sd22_2 224 250 - -
Lapu1g01859 1027 ProSiteProfiles Leucine-rich repeat profile. 604 626 IPR001611 GO:0005515
Lapu1g01859 1027 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 320 387 - -
Lapu1g01859 1027 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Lapu1g01859 1027 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 388 474 - -
Lapu1g01859 1027 Gene3D Ribonuclease Inhibitor 38 186 IPR032675 -
Lapu1g01859 1027 Gene3D Phosphorylase Kinase; domain 1 714 831 - -
Lapu1g01859 1027 Pfam Protein kinase domain 754 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01859 1027 PRINTS Leucine-rich repeat signature 131 144 - -
Lapu1g01859 1027 PRINTS Leucine-rich repeat signature 602 615 - -
Lapu1g01859 1027 FunFam Leucine-rich repeat receptor-like protein kinase TDR 475 674 - -
Lapu1g01859 1027 FunFam Leucine-rich repeat receptor protein kinase MSP1 715 831 - -
Lapu1g01859 1027 FunFam Predicted protein 216 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01859 Lapu-Chr1 31709154 31712626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01859 19 925 Receptor kinase-like Gene Family AT4G08850 43.382 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu1g01859 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01859 - - gmx:100811066 1454.11