Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01853 ATGAATCATCCTTGTGCAAACTCTAGGAGCCTGGTGTCACAAATCCTGAATAGATGTCTTCTAGTATGCATGATCTTGAACAAGGAATCAACAATTGCTGCAACGCCTGCAGGAAATGAAACTGATTTGCAAGCTTTACTTGACTTCAAGGGTAGGATGGTAGAAGATCCATTCAACATTATGAGTTCTTGGAATGACTCAATCCATCACTGCGATTGGATAGGAATCACATGCAACATCTCCAATGGAAGGGTCATGGACCTTAGCCTTGAGCAACTGAGACTAGGAGGCACCCTTACACCATTCATAGGAAACCTCACATTCCTCAACACACTCAACTTGTTAAACAATAGCTTCCATGGTGAATTTCCTCATGAGGTGGGTCGTCTACTCTATCTGCAACATCTAAACTTCAGCTATAATAACTTTGGTGGGAGTATTCCAAGTAATCTCAGTCACTGCACAAAACTGAAAGTACTAGCTACAGGTGCTAACAGCTTTACAGGAACAATCCCAACTTGGATAGGAAACCTTTCTTCTTTGTCTCGCATTAGCTTTGGCTTAAACAACTTCATCGGAAGCATACCACACGAGGTAGGCCTTTTATCAAGCTTGACATATCTTGTGCTATATGGGAATTACTTGTCTGGTTCAGTTCCTTCTTCAATCTATAACATATCTTCCTTATACTATTTCACTTTTACTCAAAACCATCTTCATGGGAACTTACCAGCTGATGTTGGATTTACTCTTCCTAACATTCAAGTATTTGCTGGTGCGGTCAACAATCTCACAGGTTCTGTCCCTGCATCATTGTTGAATGCATCAAAACTAGAGATTCTTGACTTTTCCGTGAATGGTCTCACTGGAGCACTGCCAAAGAACTTTGGGATCTTGAACAGGTTAACTAGACTTAGCTTTGAACACAACAGACTTGGAACTGGGAAAACAGAAGATCTTAGCTTTCTTGATTCTTTGGTCAACTGCACAGTTCTACAAGTTTTACGTCTAGGAGTAAATAATTTTGGTGGAGTATTGCCTAAATCAATTGCTAATTTCTCAAGCCAAATGAACACATTTGCCCTTAGTTCCAATGGAATACACGGAAATATACCAGCTGGAATTGGCAATCTTGCTAACCTGGCCCTCATATCTTTGGAAGGAAACCGGCTAACTGGTAGTCTTCCCGATGCATTAGGTAAGCTGAAAAATCTGAGAGAATTGTATCTGAATGTCAACAAATTTTCAGGTAGAATCCCGTCCTCCTTGGGAAATTTGTCTGTATTAATAAAACTCTTTCTGGAAGAGAACAACTTTGAGGGAAGCATCCCTTCTAGTCTTGGAAACTGCCAAAATTTATTGGTACTCAGCCTTTATAGCAACAAGCTCAGTGGCAACTTACCAGCAGAAGTTGTTGGCCTTTCATCACTAGCCATATACTTAGATGTATCTCATAATGCTTTGTCAGGGACTCTTCCAGCTGAAGTGAGTAAGCTACATAACCTTGGAGCGTTGGTGCTGTCTGAGAACAACTTTTCTGGAGTCATTCCATCTTCTCTTGGAAATTGCATTAGCTTGGAAAAGCTGCATTTGGAGGGAAATTCTTTTGAGGGAAACATCCCTCAAACTTTAAAGAATTTGAGAGGTTTACTTGACATAGATCTTTCACGAAATAACTTGTCTGGTAAGATTCCTGAGTTTCTTGGGGAGTTCACTGAGCTCAACCATCTAAATCTTTCATACAATAATTTTGAAGGTGAAATACCAAAGAACGGAATATTCAAAAATGCTACTTCCCTTTCATTATATGGCAACAGCGAACTATGTGGGGGTGTCCCAGAACTAAATTTCCCTGCATGCACTGTCAGGAAAGCTTCTCTGGCAAGAAAACTTCTTGCTCTTAAGGTGACTATCCCTATAGCTTGTGCACTTATATTAATATTAATTACATTATGTTTTCTTAAATTGTTCCCCATAGCTAAAAGATCAAAAAAGAAAACTCCTACATCAACTACTGAAAGGGATTTGGGATGGGAAATTTCTTACTCAGAAATTTACAAGTGCACTGGTGGGTTCTCCCAGGATAACCTGATTGGTTCGGGAAGTTTTGGTTCTGTATACAAAGGAATTCTCTCAGCAGATGAAACAAGTGTTGCAGTTAAAGTATTAAACCTTCAACAGAGAGGAGCATCTAAGAGCTTCATTGATGAATGCCAAGTTCTGAGAAGTACAAGGCACCGCAACCTTCTCAAGATCATAACTGCCATCTCAGGAATTGATCATCAAGGCAATGACTTCAAAAGTCTTGTGTTTGAGTACATGTCTAATGGAAGTTTAGAAGATTGGTTGCATCCTATAAGCAATTTACAATTTCAGAAAAAGACATTGAGATTCATTCAAAGACTGAACATAGCGATTGATGTTGCTTGTGCACTGGAATATCTCCACCACTTCTGTGAAACTCCAATTGTTCATTGTGACATAAAGCCAAGCAATGTGCTTCTTGACAACGATATGGTTGCCCATGTTGGTGACTTTGGATTAGCTACATTTCTGTTTGAAGAATCAAGCAAGTTATCCACACAACCAGTGCTGTCAGCTAGCCTAAGGGGTTCCATTGGCTACATCCCTCCAGAGTATGGTGTGGGTGGGAAGCCTTCTACACTTGGAGATATATACAGCTATGGGATACTGTTACTGGAGATTTTCACAGGAAAAAGACCAACAGATGAAGCATTTGAAGATGGCATGGGAATTCAACAGTTTGTAGCAATGGCTCTACCTAACTATGTCATGGATATAGTTGATCCTTCACTAGTCTCTGAAGAAGGTTTTGCTGGGGGAAGTGAAGAATTTGAGAGTGAAGAGAAAGCTATAAGTAGGTACAATGAGATTGAAGCCACGGATAAAGGTTTGATTGAGGATTGCTTTGTGTCTCTGATGCAAATTGGAATGTCTTGCTCTGCAAATCAACCTAGTGAACGAATGCCAATCACTGTGGTCATCAACAAACTACATACTGTAAAAAACGTTTATACAGATAAAGCATAG 3051 0.3986 MNHPCANSRSLVSQILNRCLLVCMILNKESTIAATPAGNETDLQALLDFKGRMVEDPFNIMSSWNDSIHHCDWIGITCNISNGRVMDLSLEQLRLGGTLTPFIGNLTFLNTLNLLNNSFHGEFPHEVGRLLYLQHLNFSYNNFGGSIPSNLSHCTKLKVLATGANSFTGTIPTWIGNLSSLSRISFGLNNFIGSIPHEVGLLSSLTYLVLYGNYLSGSVPSSIYNISSLYYFTFTQNHLHGNLPADVGFTLPNIQVFAGAVNNLTGSVPASLLNASKLEILDFSVNGLTGALPKNFGILNRLTRLSFEHNRLGTGKTEDLSFLDSLVNCTVLQVLRLGVNNFGGVLPKSIANFSSQMNTFALSSNGIHGNIPAGIGNLANLALISLEGNRLTGSLPDALGKLKNLRELYLNVNKFSGRIPSSLGNLSVLIKLFLEENNFEGSIPSSLGNCQNLLVLSLYSNKLSGNLPAEVVGLSSLAIYLDVSHNALSGTLPAEVSKLHNLGALVLSENNFSGVIPSSLGNCISLEKLHLEGNSFEGNIPQTLKNLRGLLDIDLSRNNLSGKIPEFLGEFTELNHLNLSYNNFEGEIPKNGIFKNATSLSLYGNSELCGGVPELNFPACTVRKASLARKLLALKVTIPIACALILILITLCFLKLFPIAKRSKKKTPTSTTERDLGWEISYSEIYKCTGGFSQDNLIGSGSFGSVYKGILSADETSVAVKVLNLQQRGASKSFIDECQVLRSTRHRNLLKIITAISGIDHQGNDFKSLVFEYMSNGSLEDWLHPISNLQFQKKTLRFIQRLNIAIDVACALEYLHHFCETPIVHCDIKPSNVLLDNDMVAHVGDFGLATFLFEESSKLSTQPVLSASLRGSIGYIPPEYGVGGKPSTLGDIYSYGILLLEIFTGKRPTDEAFEDGMGIQQFVAMALPNYVMDIVDPSLVSEEGFAGGSEEFESEEKAISRYNEIEATDKGLIEDCFVSLMQIGMSCSANQPSERMPITVVINKLHTVKNVYTDKA* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01853 1016 Gene3D Ribonuclease Inhibitor 150 197 IPR032675 -
Lapu1g01853 1016 Gene3D Ribonuclease Inhibitor 41 149 IPR032675 -
Lapu1g01853 1016 Gene3D Ribonuclease Inhibitor 317 620 IPR032675 -
Lapu1g01853 1016 Pfam Leucine Rich Repeat 404 426 IPR001611 GO:0005515
Lapu1g01853 1016 Pfam Leucine Rich Repeat 133 154 IPR001611 GO:0005515
Lapu1g01853 1016 Pfam Leucine rich repeat 525 584 IPR001611 GO:0005515
Lapu1g01853 1016 Gene3D Ribonuclease Inhibitor 198 316 IPR032675 -
Lapu1g01853 1016 Gene3D Transferase(Phosphotransferase) domain 1 774 1015 - -
Lapu1g01853 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 662 773 - -
Lapu1g01853 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 197 292 - -
Lapu1g01853 1016 SMART LRR_typ_2 571 596 IPR003591 -
Lapu1g01853 1016 SMART LRR_typ_2 202 225 IPR003591 -
Lapu1g01853 1016 SMART LRR_typ_2 499 522 IPR003591 -
Lapu1g01853 1016 SMART LRR_typ_2 130 154 IPR003591 -
Lapu1g01853 1016 SMART LRR_typ_2 402 426 IPR003591 -
Lapu1g01853 1016 SMART LRR_typ_2 378 401 IPR003591 -
Lapu1g01853 1016 Pfam Protein kinase domain 693 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01853 1016 SUPERFAMILY Protein kinase-like (PK-like) 666 1005 IPR011009 -
Lapu1g01853 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 774 1016 - -
Lapu1g01853 1016 Gene3D Phosphorylase Kinase; domain 1 674 773 - -
Lapu1g01853 1016 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Lapu1g01853 1016 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 262 1006 - -
Lapu1g01853 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Lapu1g01853 1016 SUPERFAMILY L domain-like 360 610 - -
Lapu1g01853 1016 SUPERFAMILY L domain-like 39 312 - -
Lapu1g01853 1016 SMART serkin_6 692 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01853 1016 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Lapu1g01853 1016 ProSiteProfiles Protein kinase domain profile. 692 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01853 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 318 626 - -
Lapu1g01853 1016 FunFam Leucine-rich repeat receptor-like protein kinase 39 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01853 Lapu-Chr1 31634791 31638008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01853 39 1012 Receptor kinase-like Gene Family AT3G47570 43.013 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu1g01853 Pkinase 8.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01853 - - gmx:106794146 1612.43