Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01843 ATGGCATATTCAGAAATGGCAAATGGGAAGGGTTCGTGGAACTCCAAGGGAAACACCATCACTTGCAAAGCTGCCGTGGCTTACGGTCCCGGAGAACCCTTCGTGGTGGAAGAAATTCTTGTTCATCCTCCTCAGAAATTGGAGGTTCGAATCAAAATCCTCTACACCTCCATTTGCCACACCGATCTTAGCGCATGGCGAGGCGAGAACGAGTCTCAACGTGCTTACCCTCGTATCTTGGGCCATGAAGCATCCGGGATTGTTGAGAGTGTGGGGGAAGGGGTGAGTGAGGTGGAGGAAGGGGACATAGTGGTGCCGATATTCAATGGGGAGTGTGGAGAGTGTTGCTATTGCAAGTGTGAGAAGAGCAACATGTGTGAGAGATATGGGGTGAACCCCATGAAGAAGGTGATGGAAGGGGATGGCAGAAGCAGATTCTCAACACTTGATGGAAAACCCATCTTCCATTTCTTGAACACTTCCACTTTCTCCCAGTACACGGTGGTGGATTCCGCCTGTGTCGTTAAGTTTCCTCACTCCGATCACTCTCTCACCGTCAAAAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGGGTTGGAGCTGCTTGGAACACAGCCAATGTGCATTCTGGTTCATCAGTGGCTGTGTTTGGTCTAGGAGCTGTTGGCCTAGCTGTTGCAGAAGGGGCACGAGCCAGAGGTGCTTCCAAAATAATAGGTGTTGACATCAATCCTGATAAATTCATCAAAGCTCAAGCAATGGGAGTCACTGACTTCATAAATCCAAAGGATGAAGAGAAACCAGTGTACGAGAGAATAAGAAAAATGACTGATGGAGGTGTAGACTACAGTTTTGAATGTACTGGAAACGTGGATGTTCTAAGGGATGCATTTTCGTCTGCTCATGCGGGCTGGGGATTGACTGTAATATTGGGAATTCATGCATCACCAAGCTTGCTTCCTATCCACCCAATGGAGCTGTTCGATGGCCGAAGTATCATAGGATCAATATTTGGAGGTTTCAAAGGGAAAAGTCAGTTGCCTCATTTTGCCACACAATGTGGACATGGAGTGGTGAAGTTGGATAATTTCATCACTCACGAGCTTCCCATTGAGGAGATAGACAAAGCCTTCGATCTTTTGATAACAGGGAAGTCACTGAGATGTCTTCTGCACTTCTAA 1185 0.4768 MAYSEMANGKGSWNSKGNTITCKAAVAYGPGEPFVVEEILVHPPQKLEVRIKILYTSICHTDLSAWRGENESQRAYPRILGHEASGIVESVGEGVSEVEEGDIVVPIFNGECGECCYCKCEKSNMCERYGVNPMKKVMEGDGRSRFSTLDGKPIFHFLNTSTFSQYTVVDSACVVKFPHSDHSLTVKNLTLLSCGVSTGVGAAWNTANVHSGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTDFINPKDEEKPVYERIRKMTDGGVDYSFECTGNVDVLRDAFSSAHAGWGLTVILGIHASPSLLPIHPMELFDGRSIIGSIFGGFKGKSQLPHFATQCGHGVVKLDNFITHELPIEEIDKAFDLLITGKSLRCLLHF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01843 394 PANTHER ALCOHOL DEHYDROGENASE 18 391 - -
Lapu1g01843 394 FunFam S-(hydroxymethyl)glutathione dehydrogenase 199 337 - -
Lapu1g01843 394 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 81 95 IPR002328 GO:0008270|GO:0016491
Lapu1g01843 394 Gene3D - 199 337 - -
Lapu1g01843 394 SUPERFAMILY GroES-like 344 394 IPR011032 -
Lapu1g01843 394 Pfam Alcohol dehydrogenase GroES-like domain 48 142 IPR013154 -
Lapu1g01843 394 Gene3D - 25 389 - -
Lapu1g01843 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 188 353 IPR036291 -
Lapu1g01843 394 FunFam Alcohol dehydrogenase 6 25 211 - -
Lapu1g01843 394 SUPERFAMILY GroES-like 16 218 IPR011032 -
Lapu1g01843 394 Pfam Zinc-binding dehydrogenase 222 341 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01843 Lapu-Chr1 31514115 31529360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01843 48 383 Monolignol Biosynthesis Gene Families AT2G21890 26.000 1.20e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01843 K00001 - gmx:100815166 640.188