Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01820 ATGGCTGATGTAAATGCTGCTTCATTTGAGGCCTTTCTCCAAGGATGGATGGTGCGCCAAAAAGACTTCCTTGGTGAGCTTCACTCAGCTCAGCAACAATATCAGGAGGGGCGGAGAGCTGATGTAAGGCCATTGATCGACAGGGTCATCAGCCACTATGGACAATACTTTGAAGAGAAATCAAAGCTTGCACACCACAATATTTTTCTTGTTTTCTCACCACCATGGTTCAGTTCACTGGAAAATTCCTTTATTTGGGCAGGGGGGTTCAAGCCTGGAGTGGCTTTCCAGGTTGTGAACACAGCTTTGCGGGACTTGACAGAAGACCAAAAGGAGATGATCAGTCAGCTGAATCAAGAAACCAAGGTGAAGGAGAGAACTCTCAATGATGAGTTGGCCAAGCTTCAAGAGAGTGTGGCAGATTCTCCGCTGGTGGACCAGGCCAGAAGCCAAGGAAGACTGTGTTTAAGCGGGTCCTTCGTGATAGACCCAAGTTCGGTTCCAAGCACTCTCAAAGAGAAATTGGAGAATCTGTTAGCAAATGCGGATGCTTTAAGAACGGAAACCGCTTTGAAGATTTTGAAGATACTGAGACCTGCTCAGATTGTCGCATTCATGGCTGCTGCGGCTGAGCTACAGATCAAGATCAGGTCTTGGGGTTTGGACAAGGAAGCCCAGAATGGAGGCCAACCATGA 696 0.477 MADVNAASFEAFLQGWMVRQKDFLGELHSAQQQYQEGRRADVRPLIDRVISHYGQYFEEKSKLAHHNIFLVFSPPWFSSLENSFIWAGGFKPGVAFQVVNTALRDLTEDQKEMISQLNQETKVKERTLNDELAKLQESVADSPLVDQARSQGRLCLSGSFVIDPSSVPSTLKEKLENLLANADALRTETALKILKILRPAQIVAFMAAAAELQIKIRSWGLDKEAQNGGQP* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01820 231 Coils Coil 118 138 - -
Lapu1g01820 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 228 - -
Lapu1g01820 231 Pfam Seed dormancy control 25 100 IPR025422 GO:0006351|GO:0043565
Lapu1g01820 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01820 Lapu-Chr1 31193286 31193981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01820 7 218 Calmodulin-binding Proteins AT1G77920 29.358 5.45e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01820 - - vun:114185413 382.489