Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01805 ATGAAGACCCATTTAGCCTCCACGCGGGTCATAATTGTGGCCTCTCTCTGTTTCCTTGCAAGCTTGGAATTGGAAGCCAAAACCATCGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGGGAAATTCAGAAGGCTTTCCACAAGTTATCTCTCCAGTATCACCCTGACAAGAACAAAGCCAAGAGTGCACAAGAGAAGTTTTCTCAGATCAATAATGCGTATGACATTTTATCTGATGAGGAGAAGAGAAAGAATTATGACATGTATGGAGATTCAAATGGCAATCCTGGATTTCAAGGTGGTCATCCTGGATTTCAAGGTGGCCATGCTGAAGGTCGGGGTGGATATACTTATTTTACAGGGGGTGGTCCTTGGCAAAGCCATTCTAACTTCAAAGCAGGGGGGGACTGGCAGGGTGGATCTAAGTCATTCTCCTTTTCCTCTGGTGGTTCAAATACTTTTGGGATTGGCTTGGATGATATTTTTGGCAGTATTTTTGGTGGTGGAGGTGGTGGGAGTCAGTTTGGTGGTTTTGGCAGTTCAGCTAATACTGAATCGACGTCCACAGCTTCTCCCCAACGTCTTACATCTATAAATTCACATATCTACAAAAAAGAGATTGAAAATGCAGGGATGACTTGGATTTTGTTGTCTTATAGACCTAGAAGTGCATCGAAGCATATCCAATACTTTGAATCCATTACAGAGGAAGTTGCTAGTTCATTACAGGGAGCTTTGAAGGTTGGAAGCGTTAACTGTGATAAGGAAGGCTCATTCTGTAAAGAGCTTGGCATATATCCACAGAAAGCTCCTAGAATTTTTGTTTTTTCTTACAAGGACATTGAAATAGGTTCCTTGGTGGAGTACAGTGGACACTTGGCTGCTAAGAATTTGAAGGCTTTCACTCAAGAACACTTGCCGAGGTTTTCCAAGCGAACCAACTTGGATAGTCTTGACCAATTCAGCGCTACCGGAAAGTTGCCTAGGGTGCTGCTTCTCTCCACCAAGAAGGACACTCCAGTAATTTGGCGTGTTCTTAGTGGCTTGTATCACAAACGTATTACTTTCAGGGATGCAGAGGTGCCCGATGTTTCTGATCCAAGAGTAAAAAATCTAGGAGTTGATGCACTTCCATCAATTGTAGGTTGGCTCCCTAATGGAGAAAAACGTGTTCTGAAAACTGGGATTTCTGTAAAAGATTTAAAATCTGCAGTTCTTGATCTTAGTCACATACTCGATAATTTTGAAGAACTAAGTAAAAAGGAAGCATCACGTCAGGCCAAGAAAGCACAAACTGTTCCAGACGAGGGACGCATACCATTACTTTCTCAATCAAACTTTGAGGCTCTTTGTGGTGCGAAAGCTCCGGTCTGCATAATTGGTGCCTTCAGGTCTTCTAAAGACAGAGAAAAGCTAGAGTCAATCCTCTCTTTGGTCTCTCAAAAATCTTTGTCTAGACGACCAAATGGTGGAAGCAGCAGCTCTAGGGACTCCATTTCTTATGCTCTTTTAGATGCTGCAAAGCAACAGTCATTTCTAAATGCATTTGACAAAACAGGTTATAAATCATCAAATAAGTTGTTGATTGCTTACAAAGCTCGTAGAGGAAAGTACAGTGTATTTAGGGGTGAAATGACAATAGAGGGGGTGGAGAATTTTATTGGCTCCGTTCTGAGTGGAGATATATCCTTCAGAGAAACACGTAGGAAGCCTGTACTAGAGCAATAG 1740 0.4236 MKTHLASTRVIIVASLCFLASLELEAKTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKAKSAQEKFSQINNAYDILSDEEKRKNYDMYGDSNGNPGFQGGHPGFQGGHAEGRGGYTYFTGGGPWQSHSNFKAGGDWQGGSKSFSFSSGGSNTFGIGLDDIFGSIFGGGGGGSQFGGFGSSANTESTSTASPQRLTSINSHIYKKEIENAGMTWILLSYRPRSASKHIQYFESITEEVASSLQGALKVGSVNCDKEGSFCKELGIYPQKAPRIFVFSYKDIEIGSLVEYSGHLAAKNLKAFTQEHLPRFSKRTNLDSLDQFSATGKLPRVLLLSTKKDTPVIWRVLSGLYHKRITFRDAEVPDVSDPRVKNLGVDALPSIVGWLPNGEKRVLKTGISVKDLKSAVLDLSHILDNFEELSKKEASRQAKKAQTVPDEGRIPLLSQSNFEALCGAKAPVCIIGAFRSSKDREKLESILSLVSQKSLSRRPNGGSSSSRDSISYALLDAAKQQSFLNAFDKTGYKSSNKLLIAYKARRGKYSVFRGEMTIEGVENFIGSVLSGDISFRETRRKPVLEQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01805 579 Gene3D DnaJ domain 27 180 IPR036869 -
Lapu1g01805 579 PRINTS DnaJ domain signature 66 86 IPR001623 -
Lapu1g01805 579 PRINTS DnaJ domain signature 32 50 IPR001623 -
Lapu1g01805 579 PRINTS DnaJ domain signature 86 105 IPR001623 -
Lapu1g01805 579 PRINTS DnaJ domain signature 50 65 IPR001623 -
Lapu1g01805 579 SUPERFAMILY Chaperone J-domain 27 128 IPR036869 -
Lapu1g01805 579 CDD PDI_a_family 240 305 - -
Lapu1g01805 579 Coils Coil 64 84 - -
Lapu1g01805 579 PANTHER DNAJ PROTEIN ERDJ3A 10 578 - -
Lapu1g01805 579 MobiDBLite consensus disorder prediction 94 113 - -
Lapu1g01805 579 SMART dnaj_3 29 86 IPR001623 -
Lapu1g01805 579 Gene3D Glutaredoxin 195 317 - -
Lapu1g01805 579 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Lapu1g01805 579 Pfam DnaJ domain 30 91 IPR001623 -
Lapu1g01805 579 ProSiteProfiles dnaJ domain profile. 30 94 IPR001623 -
Lapu1g01805 579 SUPERFAMILY Thioredoxin-like 197 311 IPR036249 -
Lapu1g01805 579 CDD DnaJ 30 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01805 Lapu-Chr1 31046530 31049976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01805 32 93 C2H2 Transcription Factor Family AT1G74250 39.706 8.34e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01805 - - gmx:100796871 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01805 1 31046530 31049976 Lapu1g01805 1 31046530 31049976 ECH