Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01802 ATGGAGTGCATCAACCCTACCTCTTGTGAAGGGTCATCATCTTCCAAGAACAAGAGCAAGGAGAAAAAGGGTGTGAAGAAAGGCAACAAGGGAGGGGTGAAGCTTTCCACTGATCCACAAAGCGTGGCAGCCAGAGAAAGAAGACACAGAATCAGTGACAGATTCAAGATCCTTCAGAGCATGGTCCCTGGTGGGAGCAAGATGGACACAGTGTCCATGTTGGAGGGAGCCATTCACTACGTGAAGTTTCTCAAAACCCAGATTTGGCTCCACCAAGCATTGATAAACTATGTAGATATTGATCATGATGAGGCCCCGGTATACATCCCGGCAGAGTACAATTTCCCTCAAGAACATTCCATTTCTCTTCAGCAAAACCCTTCTTCAGTTTCGGTGCATTCTCAGCATAGTCTACCACAGCCACCACTAGCACAGTGCTACTTCCAAGGTGAAGAAGATTGTAACACCTTTGATGCCACTATGAAATATTGGCCAGCTTAG 501 0.4651 MECINPTSCEGSSSSKNKSKEKKGVKKGNKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEGAIHYVKFLKTQIWLHQALINYVDIDHDEAPVYIPAEYNFPQEHSISLQQNPSSVSVHSQHSLPQPPLAQCYFQGEEDCNTFDATMKYWPA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01802 166 SMART finulus 41 90 IPR011598 GO:0046983
Lapu1g01802 166 MobiDBLite consensus disorder prediction 1 47 - -
Lapu1g01802 166 Pfam Helix-loop-helix DNA-binding domain 45 84 IPR011598 GO:0046983
Lapu1g01802 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Lapu1g01802 166 Gene3D - 36 92 IPR036638 GO:0046983
Lapu1g01802 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 99 IPR036638 GO:0046983
Lapu1g01802 166 FunFam Transcription factor LAX PANICLE 38 103 - -
Lapu1g01802 166 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 22 150 IPR045843 GO:0003700|GO:0006355
Lapu1g01802 166 CDD bHLH_AtIND_like 36 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01802 Lapu-Chr1 31010238 31010738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01802 25 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.067 2.13e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu1g01802 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01802 - - gmx:113000114 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01802 1 31010238 31010738 Lapu1g01802 1 31010238 31010738 ECH