Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01799 ATGAAGATGGAAGAAGAGAGACACGTCTCGGAATGTTCCAAGACAAGCCCTTCTAACGAAGAAGGTTGTGAAGGAGGTGATGATGAGGAGAATGAAGATGAGAGTATGCAGAACAACAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGGCAACAGTGAGGCCTTATGTTAGATCGAAGTTGCCTAGACTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTGGTTCTTCAGCTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGAAGCAAGAAGGTGGATACAAATCAAGTATTGGGTGATCCTAGGCTCCTTGTAGAAACTGGCGACAGAAACGTTTACAATCTTAGCCAAATTCCCATGCTTCAAGGCTACAATATTCCAAGCCAAACTCCAACATTCAGATATGGATATGGGGATGCTTCTCTTGCTATCTATGAAAACATGGTGAACAGACCTTGCATGAATAGGAGTTCAGTAGATGAATCTGGAGCTGAATTTTGTGGCATCAGATTGACTGAGAAGACTAATGGGACCAATAGTAACATCAATTGGAGTCATAATATGCTTCAAGTTGATTCTTCCAGTTTTAATGAACCATCAACAAATAAAGTCCACGAACCAAAACATAAGTTCTTGTCGTTTGGTGGCAATGAATCCTTAATCAAAAGGAGCCAAGATGATCTACATCAATCAACACAAATGCAGCCAAGTGCACAAGAGCTCATGCCAAACAATAAGATGGCTACAAATCAGGAGGAACTAAAGAGCTTAAAACGGAAGGCTTCAGATACTGATATTGATTTGAATCTGTCACTTAAATTAAGTTCAATGGTCAGAGCTGAGGACCAAGGAAGCATGGTGGACCATGAAATTGATAGCAATCTATCACTCTCTTTGTGTTCTCAATCCTCCTCTTATCATAGCAGCAGGTTAAGAAAATCACAAGATCATTCTAAGGAGCAAGGGGAAAGAGCCAGAACTTTGGATCTCGCTATATGA 1092 0.4093 MKMEEERHVSECSKTSPSNEEGCEGGDDEENEDESMQNNNGGSSSNSTVEENEKKATVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDTNQVLGDPRLLVETGDRNVYNLSQIPMLQGYNIPSQTPTFRYGYGDASLAIYENMVNRPCMNRSSVDESGAEFCGIRLTEKTNGTNSNINWSHNMLQVDSSSFNEPSTNKVHEPKHKFLSFGGNESLIKRSQDDLHQSTQMQPSAQELMPNNKMATNQEELKSLKRKASDTDIDLNLSLKLSSMVRAEDQGSMVDHEIDSNLSLSLCSQSSSYHSSRLRKSQDHSKEQGERARTLDLAI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01799 363 MobiDBLite consensus disorder prediction 257 275 - -
Lapu1g01799 363 MobiDBLite consensus disorder prediction 1 59 - -
Lapu1g01799 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 268 IPR046955 GO:0003700
Lapu1g01799 363 MobiDBLite consensus disorder prediction 36 51 - -
Lapu1g01799 363 SUPERFAMILY Homeodomain-like 66 121 IPR009057 -
Lapu1g01799 363 MobiDBLite consensus disorder prediction 341 357 - -
Lapu1g01799 363 MobiDBLite consensus disorder prediction 256 275 - -
Lapu1g01799 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 67 122 IPR006447 GO:0003677
Lapu1g01799 363 FunFam Myb family transcription factor 65 123 - -
Lapu1g01799 363 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
Lapu1g01799 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Lapu1g01799 363 Gene3D - 66 123 - -
Lapu1g01799 363 MobiDBLite consensus disorder prediction 339 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01799 Lapu-Chr1 30976829 30978354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01799 58 150 G2-like Transcription Factor Family AT2G42660 55.963 3.85e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu1g01799 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01799 - - gmx:102662997 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01799 1 30976829 30978354 Lapu1g01799 1 30976829 30978354 ECH