Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01796 ATGGCTTCTCAAACTCTTCTTCTCTTCCTCCTATTTCCCTTTTTCCTGCACCAAGTTGCCTCTTTCCAGGCTTTGATCTTTGAAGGATTTGATGAAAACAGTGAAATAAACTGTGAAGGATCTTCCATCATCAAAGACAGCCGTTTACTTAAACTCACTAACAGATCAACCAATATTGTAGGCCATGCATTCTATGAAACACCCTTCCAAATGCTTAACCAAACAGACCCTCCTCTTCAACCCTATGCTTATTCCTTCAGCACATACTTTGTTTTCTCAATTGTGTCCCCTAGTTCTGGCTCTGGGGGCTTTGGCCTTGCCTTCACCATAGCTCCATCAACAGAGTTTCCCGGGGCCGAGGCTGGCCATTATCTTGGTCTTTTTAACTCCATCAATGATGGGAAGGCCTCAAATCACATCTTTGCAGTTGAGTTTGACACAGTAAATGGTTACAAAGGTGATTCGGACTCTGAAGGAAACCATGTTGGGGTCAATGTAAATGGCATGGACTCAAAGATTACTGAACCAGCTGCATACATTGAGGAAGGTACTGATAGTGTAAAGGAAGATTTTAGAATGGCCAAGGTTGATGCTGTCCACGCTTGGATAGAATATGATGGTGAGAAGAGAACTCTGAATGTAACAATAGCTCCTTGGAAATTATCTAGGCCCAGCACACCACTTATTAAGAATTATAACATTGACCTTTCCAACGTTATGAAGGAAAACATGTATGTTGGTTTCTCAGCATCAACAGGTCAGGAAACAAGCTCTCATTATCTTCTAGGGTGGAGTTTTGCAGTGAATGGTGTTGCCCCTTCACTAAATATTTCTAATCTTCCAAAGCCACCACCCAAGGAGGAAGATCCATCTACATTTCCTTGGGTCACGGTTGCAATTGGCATCTTGTCTGCTTTGACTTTGAGCCTTTTGTCTCTTCTAATTATTCTGACATGTTATAAGAGATACATGGATTTTGAGGTTCTTGAGGACTGGGAGATGGATTGTCCTCACAGGTTTAGATACAAAGATCTTCACCTAGCCACAAAAGGGTTCATAGAGAGCCGACTAATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTTTTGCCAACTACAGGAACTGAAGTTGCTGTTAAGAGGATTGTGAGGAGCCCTTTCCATGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTGAGGCACAAGAATTTGGTGAATCTTCAAGGTTGGTGCAAGAAAAAGAATGATCTCCTCCTAGTCTATGATTTCATTCCAAATGGAAGCCTTGATTGTATCCTGTATAACCCCAACAGTAACTATGTTTTGAATTGGGGGCAAAGATTCAACATTCTCAAAGGCATCAGTGCTGGACTATTGTACTTGCATGAAGAGTGGGAACAAGTGGTGATCCATAGAGACGTGAAAACTAGCAATATTTTGATAGATGGGAACTTGAGTGCACGTTTAGGTGACTTTGGACTTGCAAGGCTCTATAACCATGGTCAGGTATCACACACAACCAGTGTGGTTGGCACCATTGGCTACATTGCACCAGAGTTAACTCGCACAGGAAAGGCCTCTACAAGAACTGATGTGTATGCATTTGGGGTTGTGCTACTTGAAGTGGTCACAGGTAAGAGGCCTCTTGATTCAGATCAGTTTTTCTTGGTGGAATGGGCGATTGAGAATTACCATTTGGGTCAAATTCTTGAGGTGGTTGATCCTAAGCTGGATTCAGCTTATGATGAGGAAGAAGTTGAGTTGGTTCTCAAGTTGGGTTTATTATGCACTCAACACAGACCAGATTATAGACCTACCATGAAACAAGTTACAAGGTACCTAAACTTTGATGACCCTCTTCCCGATATTGTTGATTTGGGACATGGTGGTTCTTATAGCAGCAGCAGAATGAACTCAGGTTTCTTAGAAGTCACGTCATCTTTGAGATCAGGGTATTTGTCCTCCATTAGCATGAGTACCAAGTCCATAGATGCTGGTAGATAG 2019 0.4245 MASQTLLLFLLFPFFLHQVASFQALIFEGFDENSEINCEGSSIIKDSRLLKLTNRSTNIVGHAFYETPFQMLNQTDPPLQPYAYSFSTYFVFSIVSPSSGSGGFGLAFTIAPSTEFPGAEAGHYLGLFNSINDGKASNHIFAVEFDTVNGYKGDSDSEGNHVGVNVNGMDSKITEPAAYIEEGTDSVKEDFRMAKVDAVHAWIEYDGEKRTLNVTIAPWKLSRPSTPLIKNYNIDLSNVMKENMYVGFSASTGQETSSHYLLGWSFAVNGVAPSLNISNLPKPPPKEEDPSTFPWVTVAIGILSALTLSLLSLLIILTCYKRYMDFEVLEDWEMDCPHRFRYKDLHLATKGFIESRLIGVGGFGAVYKGVLPTTGTEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDFIPNGSLDCILYNPNSNYVLNWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDGNLSARLGDFGLARLYNHGQVSHTTSVVGTIGYIAPELTRTGKASTRTDVYAFGVVLLEVVTGKRPLDSDQFFLVEWAIENYHLGQILEVVDPKLDSAYDEEEVELVLKLGLLCTQHRPDYRPTMKQVTRYLNFDDPLPDIVDLGHGGSYSSSRMNSGFLEVTSSLRSGYLSSISMSTKSIDAGR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01796 672 FunFam L-type lectin-domain containing receptor kinase V.9 21 274 - -
Lapu1g01796 672 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Lapu1g01796 672 FunFam L-type lectin-domain containing receptor kinase S.4 429 631 - -
Lapu1g01796 672 Gene3D - 21 275 - -
Lapu1g01796 672 SMART serkin_6 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01796 672 CDD STKc_IRAK 358 620 - -
Lapu1g01796 672 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Lapu1g01796 672 CDD lectin_legume_LecRK_Arcelin_ConA 26 270 IPR001220 GO:0030246
Lapu1g01796 672 Pfam Legume lectin domain 26 281 IPR001220 GO:0030246
Lapu1g01796 672 SUPERFAMILY Protein kinase-like (PK-like) 335 623 IPR011009 -
Lapu1g01796 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 285 IPR013320 -
Lapu1g01796 672 Gene3D Transferase(Phosphotransferase) domain 1 429 627 - -
Lapu1g01796 672 Pfam Protein kinase domain 354 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01796 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Lapu1g01796 672 ProSiteProfiles Protein kinase domain profile. 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01796 672 PANTHER - 20 621 - -
Lapu1g01796 672 FunFam Lectin-domain containing receptor kinase VI.3 337 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01796 Lapu-Chr1 30935067 30937100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01796 25 645 Receptor kinase-like Gene Family AT5G01560 50.000 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu1g01796 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01796 - - gmx:100802724 1127.08