Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01795 ATGATGCAGAAAGAAGATATGCAATCCTCATGGCCATTCTTTGAAGACATGAACTCAACTTTTGAATCAGGTGTTGAGTCTTGTGGCTTCACTATGTATGACCATGTTGATGATTGTGGACCCTATGCCTTTGCTATGGATGACCATGTTGGTGATTGTGGACTCAGTATACTATTGAACACTCTTGAGGATTCCGCTTCTGAAATTTGTTCTATCCCTTTTTCTTCTTCTCCCATGTTGTTCTCTAATGATCATATTCATATCCAATTTCCAATGAATGAAGAAATTGTGCAACTTCCATCACTTATGGAATTGGATGATTTTGATTCCATCTTGGATACTGAAATTGCTAGTATTCAAAGTCATGGATACCTAGGAGAGAGTGAAGGGAGTTTCATCCCTTCACAGAATTTGTCTAGTGAGGTAGAAAATGCTTGGAGTCCTACCCCATCTGTGAGATCAGAGTTGTCCACAAATCAAACGTTACCATTGACTTTACCTCAAGAAAACACTCAGATTGAAAACCAAGTAAGCCTTCTACACTTGTTGGAGGCCTATGCAGAGGCCTTGGAGCAAGGACAAAAATCACTAGCAGAAGTGATTTTGCGGTGTTTGAGCCAAAAAGCTAGTCCACTAGGTGAGTCTCTAGAGCGCTTTGTATTCTACTTGTCTCAAGGCATGACCAATCATGGAGACTATCTCAAAGGGGAGGCCTTAAAAAACCTTGAGGATGCTTTGAGGGCACTCTGTCAAGGGCTCCCAATTGGGAAAATTGCTCACTTTGCTGCTGTTTCTACAATTCTTGAAGCCATGCCAAAAGATTGTTATGGTGTACACATAGTGGACTTTTGTCTTGGACATGGGGTTCAATGGGCTTCAATGATTGAGGCTATTGCACACATGAACAAAACATTGAAATTGACATCAATTAAGTGGGGTGGTGAGGGTCTTGAGGCTGTTTCTAGTCCCTCAAATTTTGAGGAAACTAAAAGACAATTGTATGAGCATGCCAAGTCTTGTGGTTTGAAGTTGAAGATAGAGGAGAAAGGAGTGGAGGAACTTGCTGCTGAGATTAAGAAAATGAACAAAAGGGTTGGGAAGGGTGAGTTTTTGGCTTTCAATTTAATGATTGATATTCCGCATATGGGAAGAGTAAGGAGCAGAAGACAAGCCTTAGAGCTTTTTAGGGTAGCTGAGAATTTGATCAACACCTCTGGCAGCAGGGGAATTATAACTTTTGGAGATGGGGGTGCTTATGAGAAAGTGAAAAACAACTTGAATTTCAGGTCATTCTTTAAAGCACATTTGGCGCATTACCTAGCCTTGTTAGAATCAATTGAATCACATTTTCCAACTCGTTTCTCAGAAGCAAGAATTACCATGGAGCAATTGTTTTTGCAACCTTATATTTCCTCTCTTGATTGGTTACAAACATGGGAGGAGATGCACAGAGGTGGTCATGTTGAGGCTAAGATTAGCCTTAAGGGTTGCCAATTGAGCAAAAACATTTTGATGGAAATCAGAGAAGTGCTGAGAGGAAGTGAGGACTCATATCAAGCCAGAATTGAAGGACAAAATGACAATGAACTAGTTTTGGAGTATAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAACTAA 1644 0.4015 MMQKEDMQSSWPFFEDMNSTFESGVESCGFTMYDHVDDCGPYAFAMDDHVGDCGLSILLNTLEDSASEICSIPFSSSPMLFSNDHIHIQFPMNEEIVQLPSLMELDDFDSILDTEIASIQSHGYLGESEGSFIPSQNLSSEVENAWSPTPSVRSELSTNQTLPLTLPQENTQIENQVSLLHLLEAYAEALEQGQKSLAEVILRCLSQKASPLGESLERFVFYLSQGMTNHGDYLKGEALKNLEDALRALCQGLPIGKIAHFAAVSTILEAMPKDCYGVHIVDFCLGHGVQWASMIEAIAHMNKTLKLTSIKWGGEGLEAVSSPSNFEETKRQLYEHAKSCGLKLKIEEKGVEELAAEIKKMNKRVGKGEFLAFNLMIDIPHMGRVRSRRQALELFRVAENLINTSGSRGIITFGDGGAYEKVKNNLNFRSFFKAHLAHYLALLESIESHFPTRFSEARITMEQLFLQPYISSLDWLQTWEEMHRGGHVEAKISLKGCQLSKNILMEIREVLRGSEDSYQARIEGQNDNELVLEYKGTQLLRFSTWKN* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01795 547 Coils Coil 344 364 - -
Lapu1g01795 547 Pfam GRAS domain family 180 546 IPR005202 -
Lapu1g01795 547 ProSiteProfiles GRAS family profile. 170 546 IPR005202 -
Lapu1g01795 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 154 519 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01795 Lapu-Chr1 30918787 30920630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01795 163 473 GRAS Transcription Factor Family AT5G66770 24.845 2.55e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu1g01795 GRAS 1.3e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01795 - - gmx:100784347 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01795 1 30918787 30920630 Lapu1g01795 1 30918787 30920630 ECH