Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01784 ATGTCCATAAATGATTGGAAGATAAGGAAAATTCAGATGACCAAAACAATCACTTGCAGGGAAAATAATAGCAAGAAGTTCTACTGGTGTTGCAGTATTGGAACAAACTTGCTTCCTTTAATGATGTCAAGTGTTGCTTGGTCCATATGCATTGTCTGGTTTCTTCTCTTCCCCCCAAACTTTTGGTCTGCAAACATAGTAACTACCAATGCATCTGGAAATGAGACCGATCAATCTGCACTGCTCAAATTCAAAGAATCAATATCTCTTGACCCTTTTGAAGTGTTCAACTCTTGGAATAGTTCAAGCCACTTTTGCAAGTGGTCTGGAGTCACATGCAGTCCACGACACCAAAGAGTTATAGAGCTAAACCTAACAGGATATCACTTGCATGGTTTCATATCACCCCACATTGGTAACCTTTCGTTTTTGAGAATCCTCTTCCTCGAGGACAACTACTTCTATGGTGAAGTTCCACAAGAATTGGGACGTTTGTTCAGACTACGTGTACTCTATTTCACCAGTAACACATTAGGGGGAGAATTTCCCATCTACTTGACAAATTGCTCTAAACTTAGCTATTTAAGTTTAGATGAAAATCTTTTCATTGGTGAAATACCAAGGAAGATTGAATCCTTCGGCAATCTTAAACAGTTGCGTATTCGTGGGAACAATCTAACTGGACAAATCCCACCTTCCATAGGAAATTTATCTTCCCTCACTCGACTTTCATTGAGTTCAAATAAATTGGAGGGTAACATTCCAAAAGAAATAGGCATTTTGAAAAATTTGAGAATATTGGGCTTGTCAAATAATAAACTATCTGACAATATTCCATTTTCCTTATACAATTTGTCGTCTCTCCATGTCTTCTCACTCACAAACAATCAATTTAATGGTTCTTTTCCAGTCAACATGTTCCTCACCCTACCTAATCTTGAAGTTTTTACAGTGAGTGGGAATAAATTCTCAGGTCCAATCCCAGCTTCCATGACTAATGCATCTGGGATTCAAATATTGGATATTGGTGACAACCATTTGGTAGGACAAGTCCCTAGTCTAGGGAAGTGGAAAGATATTTCAACTCTGCAGCTAAGTTTAAATAATCTGGGTAGCAATTCATCAAATGACTTGCAATTTTTAAAGTCTTTGATAAATTGTAGTCAGCTAGATATATTAGATATAGGGTACAATAATTTTGGAGGGCCTTTTCCTAGGTATGTGGGCAATCTTACCACCCAGCTCACCCAACTAATGGCTGGTGGTAATAATATTTTTGGAGAAATTCCTATGGAATTAGGAAGTCTTGTTAAGTTAATTACCTTGGCTTTGGAGAAAAATAGCCTAACTGGCATCATTCCAACTACTTTTGGTAAGCTTCAAAAGATGCAATTATTAAGTTTGGGAGTAAACAAATTGTTTGGAGAGATACCTCCTTCCATAGGCAATCTGAGTCAGTTGTATTACCTAGAATTGTCATCCAATATGTTTGTTGGAAATATTCCTTCAACCATTGGAAATTGCCAACATTTACAATTTCTACATCTTTCAAATAATAATATTACCGGAGCCATACCATCACAACTGTTTGGAATTCTCTCTTTATCTACTGCACTGGACCTATCATATAACTCATTAAGTGGCAGTCTACCAGCAGAAGTGGGCATGTTAAGAAATATTGACTTGTTGGATGTGTCTGAAAATTATATCTCTGGTGTCATTCCTGAAACAATTGGAGAATGCATAACCTTGGAGTACCTTCATTTAGAGGGTAACTCCTTCAATGGAAGCATGCCCCCTTCATTGGCTTCCTTAAAAGGTCTCAGAGAATTAGACCTTTCAAGAAACAACTTGTCTGGATCAATTCCGGAAACACTACAAAACCTTTCTTTTCTAGAATACTTCAATGCTTCTTTCAACATGTTGGAGGGTAAGGTGCCAACGAATGGTGTCTTTCAAAATGGTAGTTCAATTTCAGTGACTGGCAATAGCAAGCTTTGTGGTGGGATATCTGAACTAAAGCTTCCACCTTGCCCTTTAAAAGCTAAGAAAAGAAGAACACACCATAATCTCAAGTTAGTATTGGCGATATCCTTTCTGGTTTTTTTTCTTCTTATACTATCATGTATCCTTGGTATGTATTTGATAAGGAAAAGGCACAAAAAGTCGTCTACCAATTCAACGTTTGATCAACTTCCTAAGGTATCATACCAGAACCTAAACCATGCAACTGAAGGGTTCTCATCTTGGAACTTGATAGGAATAGGAAGTCATGGGTCTGTATATAAAGGAATTCTTGATTCGATGGAGGGATTTGTTGCTATAAAGGTTCTAAACCTCCAAAACAAAGGGGCTAAGAAAAGTTTTATGGCTGAATGTAAAGCTTTAAGAAATGTTCGGCATAGAAACCTAGTGAAGGTTGTCACATGTTGCTCTAGTGTGGATTACAATGGAAATGATTTTAAAGCTTTAGTGTTTGAGTATATGTCAAACAGAAGCTTAGAGGAATGGTTGCATCCACAAAATGGAAGAGAAGAACAACCAAGAACTTTGAACCTTGAGACAAGATTAGAAATTGTGGTTGGTGTTGCTTCTGCACTGCACTATCTTCACCATGAGTGCGAAGAACCTATTATTCATTGTGATTTAAAGCCAAGTAATATTCTTCTTGATGATGACAAGGTTGCTCATGTTAGCGACTTTAGCTTAGCAAGACTTCTCTCAACAATCAACAACTTCCACAACCTTAGTACTACAAGTGGAATAAAAGGGACTATAGGTTATTCTCCCCCAGAGTATGGAGCCAGTTTTCAGGTGTCAACAAAAGGTGACATGTACAGCTTTGGAATTCTAATTCTGGAGATGTTAACTGGGAAACGACCAACAGAAGAAATGTTTAAAGATGGACACAACCTCCATAACTATGCTAAAATTTCATTTCCAAATAACTTGTTGGAAATTGTTGATGCAACTCTTATTTCAATGGAAAATGAATCTCCTACCGTGACAGTATCAGAACAGGAAAACATCTCAGAGATTGTAGATAATTTGCATCTTAATACCAAGAAGTGTTTGCTTTCATTATTTAAGATTGGTCTAGCTTGTTCAGTGGAGACACCAAGAGAAAGGATGGATATGATGGAAGTCACCAGGGAGCTAAATATGATTAGAAATGCTTTTTATGCTCCACGAATCAGAGGTAATTATATA 3210 0.3729 MSINDWKIRKIQMTKTITCRENNSKKFYWCCSIGTNLLPLMMSSVAWSICIVWFLLFPPNFWSANIVTTNASGNETDQSALLKFKESISLDPFEVFNSWNSSSHFCKWSGVTCSPRHQRVIELNLTGYHLHGFISPHIGNLSFLRILFLEDNYFYGEVPQELGRLFRLRVLYFTSNTLGGEFPIYLTNCSKLSYLSLDENLFIGEIPRKIESFGNLKQLRIRGNNLTGQIPPSIGNLSSLTRLSLSSNKLEGNIPKEIGILKNLRILGLSNNKLSDNIPFSLYNLSSLHVFSLTNNQFNGSFPVNMFLTLPNLEVFTVSGNKFSGPIPASMTNASGIQILDIGDNHLVGQVPSLGKWKDISTLQLSLNNLGSNSSNDLQFLKSLINCSQLDILDIGYNNFGGPFPRYVGNLTTQLTQLMAGGNNIFGEIPMELGSLVKLITLALEKNSLTGIIPTTFGKLQKMQLLSLGVNKLFGEIPPSIGNLSQLYYLELSSNMFVGNIPSTIGNCQHLQFLHLSNNNITGAIPSQLFGILSLSTALDLSYNSLSGSLPAEVGMLRNIDLLDVSENYISGVIPETIGECITLEYLHLEGNSFNGSMPPSLASLKGLRELDLSRNNLSGSIPETLQNLSFLEYFNASFNMLEGKVPTNGVFQNGSSISVTGNSKLCGGISELKLPPCPLKAKKRRTHHNLKLVLAISFLVFFLLILSCILGMYLIRKRHKKSSTNSTFDQLPKVSYQNLNHATEGFSSWNLIGIGSHGSVYKGILDSMEGFVAIKVLNLQNKGAKKSFMAECKALRNVRHRNLVKVVTCCSSVDYNGNDFKALVFEYMSNRSLEEWLHPQNGREEQPRTLNLETRLEIVVGVASALHYLHHECEEPIIHCDLKPSNILLDDDKVAHVSDFSLARLLSTINNFHNLSTTSGIKGTIGYSPPEYGASFQVSTKGDMYSFGILILEMLTGKRPTEEMFKDGHNLHNYAKISFPNNLLEIVDATLISMENESPTVTVSEQENISEIVDNLHLNTKKCLLSLFKIGLACSVETPRERMDMMEVTRELNMIRNAFYAPRIRGNYI 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01784 1070 FunFam LRR receptor-like serine/threonine-protein kinase EFR 376 684 - -
Lapu1g01784 1070 SMART serkin_6 747 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01784 1070 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 382 1054 - -
Lapu1g01784 1070 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 829 1065 - -
Lapu1g01784 1070 Gene3D Transferase(Phosphotransferase) domain 1 829 1063 - -
Lapu1g01784 1070 FunFam Piriformospora indica-insensitive protein 2 206 304 - -
Lapu1g01784 1070 Gene3D Phosphorylase Kinase; domain 1 712 828 - -
Lapu1g01784 1070 SUPERFAMILY Protein kinase-like (PK-like) 720 1054 IPR011009 -
Lapu1g01784 1070 ProSiteProfiles Leucine-rich repeat profile. 607 630 IPR001611 GO:0005515
Lapu1g01784 1070 ProSiteProfiles Protein kinase domain profile. 747 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01784 1070 SUPERFAMILY L domain-like 74 370 - -
Lapu1g01784 1070 Pfam Protein kinase domain 751 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01784 1070 ProSitePatterns Protein kinases ATP-binding region signature. 753 776 IPR017441 GO:0005524
Lapu1g01784 1070 SMART LRR_typ_2 261 285 IPR003591 -
Lapu1g01784 1070 SMART LRR_typ_2 605 628 IPR003591 -
Lapu1g01784 1070 SMART LRR_typ_2 436 459 IPR003591 -
Lapu1g01784 1070 SMART LRR_typ_2 141 165 IPR003591 -
Lapu1g01784 1070 SMART LRR_typ_2 508 532 IPR003591 -
Lapu1g01784 1070 SMART LRR_typ_2 460 484 IPR003591 -
Lapu1g01784 1070 SMART LRR_typ_2 237 259 IPR003591 -
Lapu1g01784 1070 ProSitePatterns Serine/Threonine protein kinases active-site signature. 878 890 IPR008271 GO:0004672|GO:0006468
Lapu1g01784 1070 SUPERFAMILY L domain-like 413 668 - -
Lapu1g01784 1070 Gene3D Ribonuclease Inhibitor 358 679 IPR032675 -
Lapu1g01784 1070 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 76 187 - -
Lapu1g01784 1070 Pfam Leucine rich repeat 215 274 IPR001611 GO:0005515
Lapu1g01784 1070 Pfam Leucine rich repeat 439 496 IPR001611 GO:0005515
Lapu1g01784 1070 Pfam Leucine rich repeat 583 642 IPR001611 GO:0005515
Lapu1g01784 1070 FunFam LRR receptor-like serine/threonine-protein kinase EFR 718 828 - -
Lapu1g01784 1070 Pfam Leucine rich repeat N-terminal domain 75 114 IPR013210 -
Lapu1g01784 1070 Gene3D Ribonuclease Inhibitor 73 356 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01784 Lapu-Chr1 30824723 30828268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01784 66 1061 Receptor kinase-like Gene Family AT3G47570 45.491 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu1g01784 Pkinase 8.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01784 - - gmx:100797146 1521.14