Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01762 ATGACCATGGGTGATCATAATAATAACTGGGGAACCTCTGAATTTAATCATCATCATCATCATCATCAAGTTGGACTTGATGTTCCAAAATTCAAGTCTGTTCAACCTCCCTCACTACCTCTCTCTCCCTCTCCTGCCTCCCCTTCTTCTTACTTGGCCTTTTCATCTGCTTTCAGCCCATCTGAGTTCTTGAACTCTCCTTTGTTTTTTCCTTCTTCAAATATTTTTGCATCTCCTACTAGTGAGGCTTCAGCTGGGCAGACCTTCAACTGGAGGAACGTTTCAGGAGAAGAACAACAACATCACAAGGAGGATGAGAAAAACTACTCGGACTTCTCTTTCCAAACCCAAATTCAATCTTCCTCAGGCATGTTTCAAGTGCAGGAACCACTTAAGAAACAAGATATATGGAAATTCAACGAACCTTCAAAGAAAACTGATTTTTCATTCGAGATGACAGCAGCAAAATCTGAATACCCTTCAATTCAGAGCTTTTCCTCAGAAATGGCATCAAACAAATCAGAACTACAAAACAATCCAGTTCCTGGATCTGGTCGTTTAGATTACGCCAATGCATCTCAGTCTGTTAGAGAACAAAAGAGATCCGAAGACGGGTTCAACTGGAGGAAATATGGACAAAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTACAAGTGCACACATCCAAATTGCTCAGTGAAGAAGAAAGTAGAGAAGTCTTTGGATGGACAAATTACTGAAATAGTATACAAGGGCCATCATAACCACCCAAAACCACAGTCTACTAGAAGAATAAACTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCAGGGATTTCTGATCAATCTGTGGTAACCTTAGGCAATCCACAGAGGGATCATTTCTCCATACAGGAAGATTCTTCAGCTTCTGTAGGAGAGGAAGAGTTAGAGCAAACATCCCAAACCAGTTATTCTGGGGGAGATGAAGATAACCTTGGATCAGAGGCCAAAAGATGGAAGGGAGATAATGGAAACGATGACTATTCCACCTCAGGGAGCAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAACCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCACATGATATCAAAGCTGTGATCACAACTTATGAAGGGAAACACAATCATGATGTGCCTGCTGCACGTGGTAGCGCAAGTTATAACATGAACAGAAATTCTCTCAATAGCAACATATCGGCTCCTATAAGACCCTCGGCAGTGAACTGTTATTCTAGCTCATCAGGCTTAAAAAATTCTCTCTATAATAATACCAGGCTTCCCGCAACTGGTAATCAAGAATCGTTTTCAATGGACAAGTTCCAGAACCCAAGAAGTTTTGGCCATTCGGCTCTTAATAAATCAATGGGTTCATATACCGATCATGCACCATACTCAGATGCTGCATACTCAAATGCTAAGGATGAGAGGAAGGATGACTCCTTCCTACAGTCGTTTCTGTCAAAGGACTTTTAA 1629 0.4113 MTMGDHNNNWGTSEFNHHHHHHQVGLDVPKFKSVQPPSLPLSPSPASPSSYLAFSSAFSPSEFLNSPLFFPSSNIFASPTSEASAGQTFNWRNVSGEEQQHHKEDEKNYSDFSFQTQIQSSSGMFQVQEPLKKQDIWKFNEPSKKTDFSFEMTAAKSEYPSIQSFSSEMASNKSELQNNPVPGSGRLDYANASQSVREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPNCSVKKKVEKSLDGQITEIVYKGHHNHPKPQSTRRINSQSIHQPSSSCTNSGISDQSVVTLGNPQRDHFSIQEDSSASVGEEELEQTSQTSYSGGDEDNLGSEAKRWKGDNGNDDYSTSGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSASYNMNRNSLNSNISAPIRPSAVNCYSSSSGLKNSLYNNTRLPATGNQESFSMDKFQNPRSFGHSALNKSMGSYTDHAPYSDAAYSNAKDERKDDSFLQSFLSKDF* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01762 542 Gene3D WRKY domain 188 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 SUPERFAMILY WRKY DNA-binding domain 363 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 Pfam WRKY DNA -binding domain 372 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 Pfam WRKY DNA -binding domain 203 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 SMART WRKY_cls 371 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 SMART WRKY_cls 202 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 MobiDBLite consensus disorder prediction 1 24 - -
Lapu1g01762 542 MobiDBLite consensus disorder prediction 166 223 - -
Lapu1g01762 542 SUPERFAMILY WRKY DNA-binding domain 198 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 MobiDBLite consensus disorder prediction 253 356 - -
Lapu1g01762 542 MobiDBLite consensus disorder prediction 263 328 - -
Lapu1g01762 542 MobiDBLite consensus disorder prediction 166 181 - -
Lapu1g01762 542 FunFam WRKY transcription factor 33 358 424 - -
Lapu1g01762 542 ProSiteProfiles WRKY domain profile. 197 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 FunFam WRKY transcription factor 191 262 - -
Lapu1g01762 542 ProSiteProfiles WRKY domain profile. 366 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01762 542 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 449 IPR044810 GO:0003700
Lapu1g01762 542 Gene3D WRKY domain 358 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01762 Lapu-Chr1 30636614 30639570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01762 197 463 WRKY Transcription Factor Family AT2G38470 63.669 6.61e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g01762 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01762 K13424 - gmx:100776837 903.664