Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01741 ATGGAAAAGGAAGGGCACAGAGAAAACAAAAGGAGAGAAAAGCAAAAGCAAAATCAAAATCAAAATATCAACTACACAAAAGTGATAAGAAGCAGAAGAAGCATGGCTTCTAAGGACAAAAGAAGAGCGTCTCTGGAACAGACGTTGCAACAACTTCGCGATGTTACAAACTCCACTGCTCTGAACAAAGCCTCCATCATTGTAGATGCCTCAAAATACATAGAGGAGTTGAAACAGAAAGTGGAGGGACTGAACTCAGAGCTGGGGATCACGGAATCATCATCAAACTCTCAAATTGATGAACTACCTATGGTGATTGTGAAAACCCTAAAAAAGGGTTTCCTCATTAATGTGCTTTTAGAGAAGAATAGCCCTGGTATGCTCGTGTCTATACTCGAAGCCTTCGAAGAACTTGGCCTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACAGCTTCCAGCTAGAAGCTGTGGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGTTGCGAGCAATCAAGAACGAGGACTAA 558 0.4265 MEKEGHRENKRREKQKQNQNQNINYTKVIRSRRSMASKDKRRASLEQTLQQLRDVTNSTALNKASIIVDASKYIEELKQKVEGLNSELGITESSSNSQIDELPMVIVKTLKKGFLINVLLEKNSPGMLVSILEAFEELGLDVLDARVSCEDSFQLEAVGRESHKNDSVDAQVVKQAVLRAIKNED* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01741 185 Gene3D - 27 102 IPR036638 GO:0046983
Lapu1g01741 185 MobiDBLite consensus disorder prediction 1 17 - -
Lapu1g01741 185 Coils Coil 35 55 - -
Lapu1g01741 185 ProSiteProfiles ACT domain profile. 116 185 IPR002912 -
Lapu1g01741 185 MobiDBLite consensus disorder prediction 1 43 - -
Lapu1g01741 185 CDD ACT_UUR-ACR-like 122 181 - -
Lapu1g01741 185 Coils Coil 67 94 - -
Lapu1g01741 185 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 14 182 - -
Lapu1g01741 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 90 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01741 Lapu-Chr1 30357557 30359200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01741 26 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 39.726 2.72e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01741 - - vra:106759069 285.034