Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01738 ATGACCCTTACAGATATCATAGTTCGTTTTTTCTTACTGTTTTCCCTTATAGGGATAGTCTCAGCCCAGTTATCCTCTACCTTTTATGGCAATACGTGCCCTAATGCACTTTCAACCATTAAAACAGAAATAGTGTCTGCTGTTAACAACGATCGTCGCATGGGGGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTACTATTGGATGATACATCAAGTTTCACAGGTGAGAAATCAGCGGGTCCCAACGCTAATTCCCTAAGAGGCTTTGATGTAATAGACACCATAAAGTCTAAAGTGGAGAGCTTATGCCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCTGTTGCAGCAAGAGATTCAGTTGTTGCACTTGGTGGAGCTAGTTGGACTGTGCCATTGGGTAGAAGAGACTCAACCACTGCAAGTTTAAGTTCTGCTAACTCAGACTTGCCTGGTCCCTCTTCAAGTTTAAGTTCCCTCATCTCTTCTTTCTCCAACAAAGGTTTTACAGCTAAAGAACTGGTTGCTCTTTCAGGATCGCACACAATTGGCCAAGCGAGGTGCTTAACTTTCAGAACAAGGATTTACAACGACACCAACATAGATTCCTCTTTTGCATCATCATTGCAAGCAAATTGCCCTAGCACAGGTGGTGACAGCACGTTGTCCCCTCTTGACACCACCAGCCCAAACACCTTCGACAATGCCTACTTCAAGAATTTGCAGAGCAAAAAGGGTCTTTTTCACTCAGACCAAGAGCTTTTCAATGGAGGATCCACTGATTCTCAAGTAAATGCTTATAGCAGCAACCCTGCAAGTTTCAAAACTGACTTTGCCAATGCCATGGTTAAAATGGGGAACCTTAGTCCACTCACTGGATCCAGTGGCCAGATCAGGACCAACTGTAGGAAGACCAACTAA 951 0.4385 MTLTDIIVRFFLLFSLIGIVSAQLSSTFYGNTCPNALSTIKTEIVSAVNNDRRMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKSAGPNANSLRGFDVIDTIKSKVESLCPGVVSCADILAVAARDSVVALGGASWTVPLGRRDSTTASLSSANSDLPGPSSSLSSLISSFSNKGFTAKELVALSGSHTIGQARCLTFRTRIYNDTNIDSSFASSLQANCPSTGGDSTLSPLDTTSPNTFDNAYFKNLQSKKGLFHSDQELFNGGSTDSQVNAYSSNPASFKTDFANAMVKMGNLSPLTGSSGQIRTNCRKTN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01738 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 FunFam Peroxidase 27 167 - -
Lapu1g01738 316 PANTHER PEROXIDASE 72-RELATED 17 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 Gene3D - 27 313 - -
Lapu1g01738 316 Gene3D Peroxidase, domain 2 161 295 - -
Lapu1g01738 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601|GO:0042744
Lapu1g01738 316 Pfam Peroxidase 41 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Lapu1g01738 316 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu1g01738 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lapu1g01738 316 FunFam Peroxidase 161 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01738 Lapu-Chr1 30320830 30324179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01738 19 316 Peroxidase AT5G05340 64.667 8.43e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01738 K00430 - gmx:100815142 548.895