Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01726 ATGAGAGAGGTGCAGAACGACACTGTAGCGACCGAACTAGCAACCCCAGACGACGACGCGCCGTCCGGCATCGTTTTGTTCGGGAAGTACGAGTTGAAGAGGTTACTGGGAGTTGGCGCGTTCGCCAAGGTGTACCACGCCACCAGCGTCGACACGCGCCAGAGCGTGGCGGTGAAGGCCGTCAGCAAAAGCAAGGTTGTAAACGGAGGTTTTACCGCCAACGTGGAACGCGAGATCTCTATCATGCGCCGCCTCCACCACTCCAACATCGTTAACCTCTTCGAAGTCCTCGCCACGAAGACGAAAATCTACTTCGTCATGGAGTTCGCCGCCGGCGGTGAACTCTTCCACGAGGTCGCCGGAAAGGGGCGGCTCGCGGAGGACGCCGCAAGGTTTTACTTCCGGCAACTCATCTCCGCCTTGAAACACTGCCACTCGCGCGGCGTGTTCCACCGCGACCTCAAGCTCGATAACCTCCTGCTGGACGAGAATGGAAACTTGAAAGTTTCCGATTTCGGGTTGAGTGCGGTCACGGGTATGATCCGACCCGACGGGTTGCTACATACGGTGTGTGGGACCCCTACCTACGTGGCACCCGAGATTCTTGTGAAGAGAGGCTATGATGGTGCGAAAGTGGATCTGTGGTCGTGCGGCGTCGTTTTGTTTGCGCTTACTGCAGGTTATCTACCCTTCAATGATTACAACCTCACGGTCTTGTACAGAAAGATTTACCGCGGCCAATTCCGATTCCCTAGGTGGATGTCTCATGATCTGAGGAATCTCTTATCACGCTTGCTGGACACGAATCCGGATACCAGAATCACCCTTGATGAGATCTACCAAGACACGTGGTTCAACACGGGTGAGGACCGCTACGAACCGGTTCGAGTCAAGGAGAATGAATGTGTTTGTGGGGAGAACCGAACCGGGGTCAATTCGCTAAACGCCTTTGACCTCATTTCTTTTTCAACGGGGTTGGACATGTCGGGTCTTTTCGAGGATCCGAACGCGTCAGATTCGGTGGAACGGGTTGTTTCCGCGGCGGCGCCGGAGAACATTATAAAGAGGGTGGAGGCAGCGGCGGAGGAGGGGAGGGTGGTGGTGAGAAAGGAGGGAAATGGTGGTGGAGCGAAGTTGGAAGGGCAGGATGGTAATTTGATAGGCCTCGTAGTGGTTTACCGGTTAACGGAAGAGCTGGTGGTGGTTGAAATGAAGAGGAGTGAGAAGGGAGGTGAATGCGGTGCGCAATTTTGGAAAGATAAACTGCGTCCTCTGCTTCTTGAGTTGGCAGGAGAACGGGAAGCGCCGGTTCCCGGTGACTTCTGTAAAATATAG 1335 0.5476 MREVQNDTVATELATPDDDAPSGIVLFGKYELKRLLGVGAFAKVYHATSVDTRQSVAVKAVSKSKVVNGGFTANVEREISIMRRLHHSNIVNLFEVLATKTKIYFVMEFAAGGELFHEVAGKGRLAEDAARFYFRQLISALKHCHSRGVFHRDLKLDNLLLDENGNLKVSDFGLSAVTGMIRPDGLLHTVCGTPTYVAPEILVKRGYDGAKVDLWSCGVVLFALTAGYLPFNDYNLTVLYRKIYRGQFRFPRWMSHDLRNLLSRLLDTNPDTRITLDEIYQDTWFNTGEDRYEPVRVKENECVCGENRTGVNSLNAFDLISFSTGLDMSGLFEDPNASDSVERVVSAAAPENIIKRVEAAAEEGRVVVRKEGNGGGAKLEGQDGNLIGLVVVYRLTEELVVVEMKRSEKGGECGAQFWKDKLRPLLLELAGEREAPVPGDFCKI* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01726 444 Pfam NAF domain 312 370 IPR004041 GO:0007165
Lapu1g01726 444 Gene3D Transferase(Phosphotransferase) domain 1 115 291 - -
Lapu1g01726 444 CDD CIPK_C 315 426 - -
Lapu1g01726 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lapu1g01726 444 SUPERFAMILY Protein kinase-like (PK-like) 26 294 IPR011009 -
Lapu1g01726 444 Gene3D Phosphorylase Kinase; domain 1 24 114 - -
Lapu1g01726 444 Gene3D Kinase associated domain 1, KA1 309 430 - -
Lapu1g01726 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 24 407 - -
Lapu1g01726 444 SMART serkin_6 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01726 444 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Lapu1g01726 444 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Lapu1g01726 444 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01726 444 FunFam CAMK family protein kinase 25 309 - -
Lapu1g01726 444 FunFam Aurora kinase A 25 113 - -
Lapu1g01726 444 ProSiteProfiles Protein kinase domain profile. 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01726 Lapu-Chr1 30182171 30183505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01726 26 432 CBL-interacting serine-threonine protein kinases AT2G30360 55.690 4.22e-159 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu1g01726 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01726 - K12761 gmx:100788245 703.36