Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01722 ATGGAATTGCCTGATACAAACACAATCAATACAGCCATGTACAAGGGGAGATTCTGCACCAGTGGTGGAGTTAAGTCTCAGCTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGCCGTTTCAGAGATGTTCTTGGCAAAGGAGCAATGAAGACTGTGTATAGAGCATTTGACGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAACAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTGAAGCATCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGTACACTTAGAGAGTATAGGCAGAAGTATAAGCGAGTAGATATCCGAGCAGTTAAGCTTTGGGCTCGCCAGATTCTTAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCAGTAATACATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTAGCAGCTATACTTCGTAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAGTTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGGTAGACATATATTCCTTTGGTATGTGCATGATAGAGTTGCTTACTTTTGAGTTCCCATACAGTGAATGCGCCAACCCAGCACAAATATACAAGAAAGTTACTTCGGGGAAGCTACCTAATGCGTTTCACAGAATCCCAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGTCAAATGTCTCAGATAGACCATCAGCGGAGGAGCTCCTGTTGGACCCTTTTTTAGCCGTGGACCAACTTGAAATACCATTGCCACCAAACATACCATTACTTCCAAATCACACTCTAAAGCTTAATTCCACTCCACTAGTTCCCATTGAGCATCATCGTGATCAAACAAAGAGTGCAGAAATGACAATTACTGGTTCAATAAACGAAAAGGACAACACTGTTTTCCTCAAAGTGAGGATATCTGACATAACGGGGCACACGAGACATGTGTTCTTCCCATTTGATACATTAAAAGATACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACAGGGTGAAGTGTCACCACCAACGACAGCACAGCTTTAACTACGAAGAAGACGAAGATGTGAATAACCACCACCCCTTCTTCTTATCATCTTCTCCGTCATCCCCTCGTGGTTCTGGCCACATGTCAGCTTCCAACTCCTTCAAGACCCATTTTCGTGGCAACCATTACCCTTTTGCTCAAGAATGGCCTCAAGATGACATGTTTTTGAACAACGACGACGCAAGCTCTCAAGCCTCCATGAACTCCTTCAAGTATTCAACCTTCCAATTCTGCGATCCGGGCCACGAAGACGAGCACGACGCAACCGAACGCAACAAGTGCACCACATTATCGTCCCGTGGCGGCGAAGAAGCCGAACCCAGTTTAGCGAACCAGGTTTTGTACCCGCCGCGGATGGAGTGTTCGTGCGGGTGCAGGTTTGGGTCGGCTCACGGGTGCCCGAGGCTGACCCGGATCCGGTCGTGCCCGCACGAGCGGCGGAGCCTGCAGCTTCAACGGTCGATGATGTTGGAGGAGATGTACAAGTACAAAAGACGCTTCTTCAACACCGTTGGCGCCGTTGAGAACATCGGGTTTCGGCATCCTCTAAGAGGTGGTGTCTGCCTTCCTCGTGTGTAG 1875 0.4704 MELPDTNTINTAMYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDIRAVKLWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIELLTFEFPYSECANPAQIYKKVTSGKLPNAFHRIPDLEAQKFVGKCLSNVSDRPSAEELLLDPFLAVDQLEIPLPPNIPLLPNHTLKLNSTPLVPIEHHRDQTKSAEMTITGSINEKDNTVFLKVRISDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSALVPTWRDRVKCHHQRQHSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNSFKTHFRGNHYPFAQEWPQDDMFLNNDDASSQASMNSFKYSTFQFCDPGHEDEHDATERNKCTTLSSRGGEEAEPSLANQVLYPPRMECSCGCRFGSAHGCPRLTRIRSCPHERRSLQLQRSMMLEEMYKYKRRFFNTVGAVENIGFRHPLRGGVCLPRV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01722 624 SUPERFAMILY Protein kinase-like (PK-like) 42 299 IPR011009 -
Lapu1g01722 624 FunFam Probable serine/threonine-protein kinase WNK1 25 121 - -
Lapu1g01722 624 FunFam probable serine/threonine-protein kinase WNK9 123 303 - -
Lapu1g01722 624 CDD STKc_WNK 38 298 - -
Lapu1g01722 624 ProSiteProfiles Protein kinase domain profile. 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01722 624 Pfam Protein kinase domain 44 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01722 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lapu1g01722 624 Gene3D Transferase(Phosphotransferase) domain 1 123 303 - -
Lapu1g01722 624 SMART serkin_6 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01722 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 510 - -
Lapu1g01722 624 Gene3D Phosphorylase Kinase; domain 1 24 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01722 Lapu-Chr1 30123085 30127512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01722 21 438 MAP Kinase Kinase Kinase AT3G51630 66.746 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu1g01722 Pkinase 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01722 K08867 - gmx:100272206 1074.69