Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01711 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCCGATTACATATGTTAAACGTGTAAGCCATAATGAGCATGTGCCTACAGTACTGCCTGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAAAACATTATTAAAGTCAATAACAACAGAACAAGAACACTATCTGCTCCATCAACTCTTGATGCTGCCGAACAAGATGCTTTGGCCTCAATTGAGTACGAGGAACAAGAAGAGTCTAAACACCGAGCTGGATCAATGAAGGAGCAGCGTTCATCTAGTCCACAACCCTTACCACTCCCATCCCCACAGGGAGGTGCTGTATTGAAGGCTATTGGCAGCTTTAAGTCAGTGACAGCTAGTGGTCCTTTATCTGCTTCTGGGCCTTTACCACTCCCACCTACTGGGTCACTTCGGAATTTTCTGTATGATGAAATTGCCACTGCTTGCCACAATTTCTCTTCGGATAGATGCATGTCAGAATGTCTTTCGTCCACCATATACAAGGCTTCCTTTGGTGACGATGTTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACACGACTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTAGCATCCTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCTCGAGAGGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTATTATATGGGAGATCTGATGGGCCATCAATAGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCATGAAGAAGGGCCATTCCAGGCAATGTATAATGAATTTTCGACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACCCCAAAGAGCAACGTATGGAGCTTCGGAATTTTTCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCATCCGAAGGAAGAGAGGAATTTAGTGAAGTGGAGCCGGCCCTTCCTAGCCGACAACTACCGGCTGTCGTTGATCATGGATCCTCAACTCAAGGGTCGGTTTCCTTCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAGAGACCTACCATGAGAACTGTTGTTGAGCATCTGAAGATGATACAGGATTTGAAATACTCATGCCGGTTCCCTCTGCAAGAGCCAGCAGCATCAAACTCTGGAAAACACATGTCAAGATCACCAAGTCTGAATGGCATCATCTGTCCAGTACCAAGGATGAACTTCTCACCATCACCACCATCTGGAGTTCCACCACTACCTGTTTCACCTCCAAGATGGTCTGGTGGAGTGCCCCTTCTCCCACCTCGCGCATGTTCTTCCAGTCTCTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1647 0.4493 MGCFTVLKSKKKKSDPITYVKRVSHNEHVPTVLPEPQTRTRSLQSAPPSFRTRVKPIQNIIKVNNNRTRTLSAPSTLDAAEQDALASIEYEEQEESKHRAGSMKEQRSSSPQPLPLPSPQGGAVLKAIGSFKSVTASGPLSASGPLPLPPTGSLRNFLYDEIATACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVEHLKMIQDLKYSCRFPLQEPAASNSGKHMSRSPSLNGIICPVPRMNFSPSPPSGVPPLPVSPPRWSGGVPLLPPRACSSSLSLEELDRQESRKSSSSASRRASVEGF* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01711 548 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01711 548 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Lapu1g01711 548 SUPERFAMILY Protein kinase-like (PK-like) 147 454 IPR011009 -
Lapu1g01711 548 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Lapu1g01711 548 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Lapu1g01711 548 PANTHER OS01G0588500 PROTEIN-RELATED 100 448 - -
Lapu1g01711 548 MobiDBLite consensus disorder prediction 491 510 - -
Lapu1g01711 548 MobiDBLite consensus disorder prediction 90 122 - -
Lapu1g01711 548 MobiDBLite consensus disorder prediction 491 548 - -
Lapu1g01711 548 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01711 Lapu-Chr1 30021820 30027326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01711 141 468 Receptor kinase-like Gene Family AT4G02010 36.336 1.02e-56 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lapu1g01711 PK_Tyr_Ser-Thr 4.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01711 - - gmx:100809117 982.245