Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01706 ATGCGGAGCATGAATGGGTACTGTGTTTGTGTTCCATTGTTTGTGTGCTTGTTATTGGCAATTGAAGTTGTTGTAGCAAAGGATTTTGAGCCTACAGATAATATCCTGCTGGATTGTGGGGGTCCTCCATCTAGTACTGATACTGATGGCCGTGTGTGGACCACTGATGTTGGTTCCAAGTTTGGTTCCTCCTCTGCAAAATCCACCACCGTATCGCCGGCGGCAACTCAAGACCCTGCCGTCCCCCAGGTGCCCTACATGACGGCACGCGTGTTCCACGCACCGTTTACCTATGCTTTCCCGGTGGCTTCCGGTTGGAAGTTCCTCCGGCTGCACTTTTACTCGGCTTCTTACTCCAATCTCAATGCATCTGATGCGCGTTTTGCGGTGACGGCGAATTCATACACGCTTCTTAGGAACTTCAGTGTTGCTCAGACCACCCTGGCTTTGAATTATGCCTACATCTTGAAGGAATTTGCCATCTATGTAGAAGGGAAAACCTTGAATGTGACTTTCACTCCTTCTACCAATGCATCCAATGCTTACGCGTTTGTTAATGGGATCGAGGTTGTCTCCATGCCTAATATTTATACTTCTACTGATGGAACTACCATGATAGTGGGTACAAATACTGCTTACACTATTGATAACAACACTGCACTTGAGAATGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCTTCCCATGATACCGGTATGTTTAGGTCATGGTCTGATGATGTTCCCTTCCTCTTTGGGGCTGCATTTGGAGTTACAGAGCCTGCTGATACAGATGTGAAGTTTGACTATCCTCCGGACACGCCAACTTATATTGCTCCACTTGATGTCTATACTACAGCCAGATCAATGGGCCCAGATCCAAAGATCAACACAAATTACAACTTGACTTGGATCTTCAACATTGATTCTGGGTTTTCTTATCTAGTGAGACTCCATTTTGCTGAGGTATCATCAAAGATAACAGAGGTTAATCAAAGAGTATTTGATATATTCCTCAATAATCAAACAGCTACTCAGGCTGATGTTATTGTCTGGGCAAGAGAACTTGGCCTTTCGCATTCTAATGGGGTGCCTGTGCATAAAGATTTCGTTGTCTTTGTTCCTGGTGGTGACGAACCACGGCAGGACCTGTGGCTTGCGTTGCATCCAGATCCATCTAGCAAGACCATGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAAATCAGTGATACTGCAGGAAATCTGGCAGGTTCAAATCCTATTCCTCCTCCTGTGCAAGACATAATTGACCCATCAACAGCTAGAGCACATAATCATGGTAAATCAAAGAATCATACAGGCATAATTACAGGAGGTGTTGCTGGAGTTGTTGTTGTTGTACTTGTGATTGGGCTATTTGCTTTTGCTGCATCCCGTCGTCGTAGACAAGGAAAGGATTCTGGTGCAAGTGAAGGGCCATCTGGCTGGCTTCCGCTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACGACAGGAAGTTACGCTTCCTCTCTCCCATCAAACCTTTGCCGTCATTTCTCATTTGCTGAAATCAAATCTGCCACAAATAACTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAGGGAGAAATTGATGGTGGAACAACCAAAGTAGCAATTAAACGTGGGAATCCGCTATCTGATCAGGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGTCACCGCCACCTTGTTTCACTGATTGGATACTGTGAAGAAAACACTGAAATGATCCTTGTTTATGATTATATGGCCTATGGAACACTCAGGGAGCATTTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACACACGGGTGCTAAACACACAATCATCCACCGGGATGTGAAGACAACAAACATTTTACTGGACGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCAAAAACAGGTCCAACATTGGATAATACCCATGTAAGTACTGTAGTAAAGGGTAGCTTTGGGTACTTGGATCCAGAATACTTCAGAAGGCAGCAGCTAACTGACAAATCTGATGTTTACTCATTTGGGGTGGTTCTCTTTGAGATATTGTGTGCCCGTCCAGCTTTGAACCCGACCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACCTCAAAGGCATTCTTGACCAAATCATTGATCCCTATCTAAAAGGCAAGATAGCTCCAGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCTGACCAAAGTATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAAAGTGCAGAGGAAAGTGGTAACGGTTTTGGTGACATTCACAATGAAGAGGAGCCGATGCTTACAGATTCCAAAGGAAAGAAGGACTCTGATGCGATGGGGGGTTATGATGGTAATATGACTGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACCCCAAGTGCTGTGTTCTCCCAGATCATGAATCCAAAAGGGCGTTAA 2700 0.45 MRSMNGYCVCVPLFVCLLLAIEVVVAKDFEPTDNILLDCGGPPSSTDTDGRVWTTDVGSKFGSSSAKSTTVSPAATQDPAVPQVPYMTARVFHAPFTYAFPVASGWKFLRLHFYSASYSNLNASDARFAVTANSYTLLRNFSVAQTTLALNYAYILKEFAIYVEGKTLNVTFTPSTNASNAYAFVNGIEVVSMPNIYTSTDGTTMIVGTNTAYTIDNNTALENVYRLNVGGNDISPSHDTGMFRSWSDDVPFLFGAAFGVTEPADTDVKFDYPPDTPTYIAPLDVYTTARSMGPDPKINTNYNLTWIFNIDSGFSYLVRLHFAEVSSKITEVNQRVFDIFLNNQTATQADVIVWARELGLSHSNGVPVHKDFVVFVPGGDEPRQDLWLALHPDPSSKTMYYDAILNGVEIFKISDTAGNLAGSNPIPPPVQDIIDPSTARAHNHGKSKNHTGIITGGVAGVVVVVLVIGLFAFAASRRRRQGKDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYLKGILDQIIDPYLKGKIAPECFKKFAETAMKCVADQSIERPSMGDVLWNLEFALQLQESAEESGNGFGDIHNEEEPMLTDSKGKKDSDAMGGYDGNMTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01706 899 Pfam Malectin-like domain 37 413 IPR024788 -
Lapu1g01706 899 Gene3D Phosphorylase Kinase; domain 1 526 617 - -
Lapu1g01706 899 SMART serkin_6 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01706 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Lapu1g01706 899 FunFam Receptor-like protein kinase FERONIA 513 617 - -
Lapu1g01706 899 PANTHER OS03G0124300 PROTEIN-RELATED 10 483 IPR046957 GO:0004672
Lapu1g01706 899 Gene3D - 220 414 - -
Lapu1g01706 899 Gene3D - 34 194 - -
Lapu1g01706 899 MobiDBLite consensus disorder prediction 825 899 - -
Lapu1g01706 899 FunFam Receptor-like protein kinase FERONIA 618 828 - -
Lapu1g01706 899 FunFam FERONIA receptor-like kinase 219 414 - -
Lapu1g01706 899 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
Lapu1g01706 899 ProSiteProfiles Protein kinase domain profile. 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01706 899 MobiDBLite consensus disorder prediction 858 892 - -
Lapu1g01706 899 MobiDBLite consensus disorder prediction 829 851 - -
Lapu1g01706 899 CDD STKc_IRAK 547 813 - -
Lapu1g01706 899 Gene3D Transferase(Phosphotransferase) domain 1 618 832 - -
Lapu1g01706 899 FunFam FERONIA receptor-like kinase 34 194 - -
Lapu1g01706 899 Pfam Protein tyrosine and serine/threonine kinase 547 809 IPR001245 GO:0004672|GO:0006468
Lapu1g01706 899 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01706 Lapu-Chr1 29982974 29986740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01706 20 899 Receptor kinase-like Gene Family AT3G51550 73.077 0.0 1298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01706 Malectin_like 3.2e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01706 - - gmx:100499644 1591.63