Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01702 ATGGACAACCTTGGAGGATCCACTAGTCTTAGGAAAGCAATCGAGGAGCTTCTTCGAGGTCGTGATTGTGCTAGACAACTCAGGGGTGTCATCAATGGGAGTGGTGAAAATGGGTCCTCTGCAACCCCATTATCTGCTAAGAAACTCGTGAAGGATGTGCTCGTGTCCTTCACCAACTCCCTCTTGATCTTGAACAACAACCCCACTTCTGAATCTCAAGATGGTTCCAATGTTCAAGTTTGGGACTCTCCCAAACATAAGGACTCTCAAGAGAGCAATTTCAAGAGTTCTACTGTTAAAGAACGAAGAGGGTGTTACAAGCGAAGAAGAACTGAACAAACAAGAGAGAAGGTGTCTGACGCTCCAATCGATGATGGCCACCAATGGAGAAAGTATGGTCAAAAGGCGATCCTGAATGCCAAATTCCCAAGGAACTACTATAGGTGCACTCACAGATTTGACCAGGATTGCCAAGCAACAAAGCAGGTGCAAAAAGTTCAAGAGGATCCAACCCTGTACAACACCATCTACTATGGTGACCACACTTGCAAGAGTTTGGCAAATCCTCAGATCATACTTGACCCTGTGTCTCCTTCATCTTCTTCCAAGTTCCTTAGCTTTGACAACTCCTTCCCTGCCCCATCAGAACAAGAGTGCCCCTTTCTCTCATCTTCTTTATGTTCATCTGTCAAAAGGGAATGCAAGGAGGAGGTTCCTCCCTCAACCTCCTCCAATGATTATCTCATCTCTTCTGAACTCACCTTTGATGGTTCACCAAGGCATGTCACTCTATCATCATCAACACTTGACTCAGAGTACAAGGCTGTGGACATTTCAGATGTCTTCTATGATTCTGCTCAACTTGACGATGTCTTTGAACCCTTCCTTGAATTTAGATAA 900 0.4489 MDNLGGSTSLRKAIEELLRGRDCARQLRGVINGSGENGSSATPLSAKKLVKDVLVSFTNSLLILNNNPTSESQDGSNVQVWDSPKHKDSQESNFKSSTVKERRGCYKRRRTEQTREKVSDAPIDDGHQWRKYGQKAILNAKFPRNYYRCTHRFDQDCQATKQVQKVQEDPTLYNTIYYGDHTCKSLANPQIILDPVSPSSSSKFLSFDNSFPAPSEQECPFLSSSLCSSVKRECKEEVPPSTSSNDYLISSELTFDGSPRHVTLSSSTLDSEYKAVDISDVFYDSAQLDDVFEPFLEFR* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01702 299 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 209 IPR044810 GO:0003700
Lapu1g01702 299 Gene3D WRKY domain 107 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01702 299 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01702 299 MobiDBLite consensus disorder prediction 65 83 - -
Lapu1g01702 299 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01702 299 MobiDBLite consensus disorder prediction 65 119 - -
Lapu1g01702 299 Pfam WRKY DNA -binding domain 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01702 299 ProSiteProfiles WRKY domain profile. 118 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01702 299 MobiDBLite consensus disorder prediction 84 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01702 Lapu-Chr1 29940778 29942719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01702 12 261 WRKY Transcription Factor Family AT3G56400 34.717 5.09e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g01702 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01702 - - gmx:100170682 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01702 1 29940778 29942719 Lapu1g01702 1 29940778 29942719 ECH
Lapu1g01702 1 29940778 29942719 Lapu10g00752 10 9361595 9363450 PCT