Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01701 ATGAGTTCCGATGAGTCCTTACTTTTGGAATCGGATCCTCGTCCTGTGATTCATCACCGCCGGGGGAAATCGGGTTCCCGTACCTATCTCTGTGGCCATGGTTCCTTCTCGTCTTCGGTGTTCGAGGCGGCTCTTGCTGACATCAGCGATTTGGATGTGAAGGAACGAAACCAGGAGGTTGTGTTTTCTAGCGATTGTAGCTTCCACACTGCGTCGTTTAGTAATACTAATAGCTCTGATAGGTGTGGTGTTGAGTCGAAGTTCCCCTGGCAGTTTCCCTTGGAATGCCCCACGCGCGAGAGGAGGCGCTCGGCATCGTGGGGTGCAATGGAGCTGCATGATGCTGATAACCGGAGCGTGCCCTTTGAGATATCCGGAGCTTCGTCTCATGTGCAGGATAGGTTGAATAGTAAATCGCAGAGGATTAGGCACAAGAGTGTGCAGTTTGATGATCCTGCTTTTCAGGAGGATGGTGCTAGGTTGATCTATATCAATGATCCCAGGAAGACCAACGACAAGTATGAGTTCACCGGGAATGAGATCCGAACTAGTAGATACACCTTTGTTACCTTTTTGCCTAAAAATCTTTTCATTCAGTTTCATAGGGTTGCGTATCTGTATTTCCTTGCTATCGCAGCGCTCAATCAGCTTCCTCCACTGGCTGTGTTTGGAAGGACTGTCTCTCTTTTCCCTCTGTTGTTTGTGCTCTGTGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGCGGCACAGGTCAGATCGCAACGAAAACAACCGGGAGTCTCTGGTGCTTCAGTCCGGTGATTTCCGATCGAAGAAGTGGAAAAAAATACAAGCTGGGGAGGTTGTTAAGATCTTTGCTGATGAGACAATTCCGGCTGATATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACCATGAATTTGGATGGAGAGTCAAATTTGAAGACAAGATATGCTCGGCAGGAAACAGCTTCGGTGGTTGCTTCGGAATCTTGTGACATTTTAGGGGTAATTAGGTGTGAGCAACCGAACCGGAATATTTATGAGTTCACTGCCAACATGGAGTTCAATGGACTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGCTGCCAGCTGAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCAGGACAGGAAACAAAAGCAATGCTGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGACTTGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCTGTTTTTCTTTTCATCATGTGTTTGGTTGTGGCCCTTGGGATGTGTCTTTGGCTGGTGCGCCACAAGAACCAGCTCGATACCTTGCCTTACTACAGAAAAAGATACTTCGTCAATGGACCCGATAATAGAAAGAAATACAAGTATTATGGTATTCCGATGGAAGCATTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATTACAATGGAGTTGGTTCGATTAGGTCAGTCATACTTTATGATTGAAGACAGGGATATGTATGATGCCAGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATATATTTTCGGACAAGACTGGAACACTAACAGAAAACAAAATGGAATTCAGGAGGGCTAGCGTACATGGGAAGAATTATGGGAGCTCCTTGCCTATGGTTGATAATACAGCAGCCATGGATGTCACTCCTAAACGCAGATGGAAGCTCAAATCTGAAATTGCAGCGGATTCTGAACTGATGATAATGTTGCAGGGAAACTCAAATAGAGAAGAAAAAATTTCTGGTCATGAGTTTTTTCTTACACTGGCTGCTTGTAACACTGTAATCCCTATACTAGGTGATGGTGGATTTTCGAGTTGTGGAACAAATGAATTAAATGAAGATATTAGATGCATTAATTATCAGGGAGAATCTCCCGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGATATACTCTTTTTGAACGTACATCAGGACATATTGCTATTGACGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGTCTGCATGAGTTTGATAGTATGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGCGGTAAAGGTGTTGGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCACTGAGAGTAACAATAACATACTGCACACAACTCAGAGCCATTTGAATGAATATTCCTCACAAGGATTGCGCACTCTTGTAATTGCCTCCAGGGATCTTTCTAATGCTGAGCTTGAGGAGTGGCAAAGCCGGTACGAAGAGGCAAGCACTTCGTTGACTGACAGATCTACTAAACTTCGGCAAACAGCAGCTCTTGTAGAAAGCAATTTAAAGTTACTTGGAGCCACTGGAATTGAGGACAAGTTACAGGAGGGTGTACCAGAAGCCATTGAGGCTCTTCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACGGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGGTCGAATGTAGAAATCTTTTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGACGTCGTCGGAGTTCGAAATACAAAACCAATGCTGGACATGGTGATCTTGATATTCCCAATGGTTTTCCCAAATGGAATCCTGGAAAGGAAGAGGGAACTATTGCTCCATTGGCACTTATAATTGATGGAAACAGTTTGGTTTACATTTTGGAGAAGGAACTGGAATCAGAGCTTTTCGACCTAGCAACTTCCTGTAGGGTTGTTCTTTGCTGTCGTGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATCTGATCAAGAGCCGCACAGATGATATGACACTGGCCATAGGCGATGGTGCCAATGACGTGTCCATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGTCAAGCAGTGATGGCATCGGATTTTGCAATGGGACAGTTTCAGTTCTTAAAAAAACTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTATTTTGGTACATATTATGCACGGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTGTTCCTACAATTATTGTTGGTATTCAGGATAAGGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAACTGTATGGTTCAGGTCACAAGCAGGAAGCTTACAATATGCAGTTATTTTGGATCACTATGATTGACACAGTATGGCAGAGTCTTGTTCTTTTCTACGTCCCATTGTTCACATATAAGGACAGTTCAATTGACATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTATTCTTGTAAATGTGCACCTTGGTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCGATCTGGGGATCAATAATCATTACGTATGGTTGCATGGTGATATTGGATTCTATACCTATCTTTCCCAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAATTATTGTGGCATTGCTCCCTCGCTTTTCTTGCAAAGTTGTCTATCAAATTTTTTGGCCTTCGGACATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAAAACGACAGGCTAATTTGCGGCCAAGGCAACAAGTTTCCAGTTAA 3876 0.4301 MSSDESLLLESDPRPVIHHRRGKSGSRTYLCGHGSFSSSVFEAALADISDLDVKERNQEVVFSSDCSFHTASFSNTNSSDRCGVESKFPWQFPLECPTRERRRSASWGAMELHDADNRSVPFEISGASSHVQDRLNSKSQRIRHKSVQFDDPAFQEDGARLIYINDPRKTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASVVASESCDILGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLESYMNRETLWLSVFLFIMCLVVALGMCLWLVRHKNQLDTLPYYRKRYFVNGPDNRKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASVHGKNYGSSLPMVDNTAAMDVTPKRRWKLKSEIAADSELMIMLQGNSNREEKISGHEFFLTLAACNTVIPILGDGGFSSCGTNELNEDIRCINYQGESPDEQALVSAASAYGYTLFERTSGHIAIDVNGEKLRLDVLGLHEFDSMRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGTESNNNILHTTQSHLNEYSSQGLRTLVIASRDLSNAELEEWQSRYEEASTSLTDRSTKLRQTAALVESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGRRRSSKYKTNAGHGDLDIPNGFPKWNPGKEEGTIAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIIVGIQDKDLSHRTLLQYPKLYGSGHKQEAYNMQLFWITMIDTVWQSLVLFYVPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLGMDINRWVLITHVAIWGSIIITYGCMVILDSIPIFPNYWTIYHLARSPTYWITILLIIIVALLPRFSCKVVYQIFWPSDIQIAREAELMRKRQANLRPRQQVSS* 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01701 1291 SUPERFAMILY Calcium ATPase, transmembrane domain M 176 1264 IPR023298 -
Lapu1g01701 1291 Gene3D - 546 558 IPR023214 -
Lapu1g01701 1291 Gene3D - 532 545 - -
Lapu1g01701 1291 Gene3D - 814 1037 IPR023214 -
Lapu1g01701 1291 Pfam Cation transport ATPase (P-type) 664 739 - -
Lapu1g01701 1291 MobiDBLite consensus disorder prediction 1 24 - -
Lapu1g01701 1291 NCBIfam HAD-IC family P-type ATPase 482 572 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu1g01701 1291 NCBIfam HAD-IC family P-type ATPase 808 866 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu1g01701 1291 NCBIfam HAD-IC family P-type ATPase 967 1083 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu1g01701 1291 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 831 IPR023299 GO:0000166
Lapu1g01701 1291 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Lapu1g01701 1291 PRINTS P-type cation-transporting ATPase superfamily signature 997 1016 - -
Lapu1g01701 1291 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Lapu1g01701 1291 SFLD p-type atpase 533 1048 IPR044492 -
Lapu1g01701 1291 FunFam Phospholipid-transporting ATPase 660 795 - -
Lapu1g01701 1291 SFLD C1.7: P-type atpase like 533 1048 - -
Lapu1g01701 1291 Pfam E1-E2 ATPase 260 507 - -
Lapu1g01701 1291 SUPERFAMILY HAD-like 536 1041 IPR036412 -
Lapu1g01701 1291 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 146 1277 - -
Lapu1g01701 1291 Pfam Phospholipid-translocating P-type ATPase C-terminal 1025 1265 IPR032630 -
Lapu1g01701 1291 CDD P-type_ATPase_APLT_Dnf-like 178 1157 - -
Lapu1g01701 1291 Pfam Phospholipid-translocating ATPase N-terminal 162 227 IPR032631 -
Lapu1g01701 1291 SUPERFAMILY Calcium ATPase, transduction domain A 259 401 IPR008250 -
Lapu1g01701 1291 NCBIfam phospholipid-translocating P-type ATPase 176 1272 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu1g01701 1291 Gene3D - 655 798 IPR023299 GO:0000166
Lapu1g01701 1291 Gene3D - 235 405 - -
Lapu1g01701 1291 FunFam Phospholipid-transporting ATPase IC 546 558 - -
Lapu1g01701 1291 FunFam Phospholipid-transporting ATPase 814 1037 - -
Lapu1g01701 1291 Gene3D - 559 575 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01701 Lapu-Chr1 29927057 29936776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01701 139 1274 Primary Pumps ATPases AT5G04930 56.031 0.0 1321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01701 K14802 - gmx:100789830 2326.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01701 1 29927057 29936776 Lapu1g01701 1 29927057 29936776 ECH