Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01697 ATGGTTTCTCTGCTTCATACAACTGCAACAACACTTCAACATAATCACACCATCTGCTTTTCTCCTCCGAAACTTAGCATCCCAATTACCATTTCCTTCTCAACAAACCGTTTCAAGAGTAGCTCTGGAAAGTGCAATGCAGTTTTTGGTGACATTCCCAAAGACTTGTTGGAGACCACTTTTCACGTGGACCACTTTCCTGTCTTCCAATCAGTGTTAGTGAAGTTTCAGAATGTAACTGAAGATTTATCAGACGTGCAGAGGTGGGGGTTTCTGATACTTGCCGGGCTGACATGGGCCTATTTAACTGCGAGGCCGGGTGTTCTTGTCGGCGCCATTGATGCATTCCTTCTGGCTCCCATGCAACTGGTTTTGGACAGTTTATCTGGAAGGAGAAATCTCAAGAGGACTGATTTTCTTATTGGAGATAAACTAGGAGAAGGGTCATTTGGTGTTGTTTATTCAGGTGTTTTGCTCCCAAAGAATGTAGATGTACAAGAGTGGATCCAGAAAAATGGAAGAGGCAAGATGACAAAGTTGAATGTCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATTGAAGGGGCAGAGGAATTTGGTGATTTTGAGGAATGGTTCAATTACAGACTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTTCTTGGAAGTTTTGTTGCTGACAAAACCAATTCACAGTTCACAAAAGGTGGAAAATGGCTAGTTTGGAAGTTTGAGGGAGGGCGCTCTCTTGCTGATTACATGGCTGATCAAAGCTTCCCATCAAACTTAGAGTCTACCGTGTTTGGACGTGTCTTGCAGGGTGTTGACTCTTCTAAACGAAATGAATTGATCATCAAGCAAATAATGCGCCAGATCATTACTTCGCTTAAGAAAATTCACGACACTGGCATTGTTCATAGGGATGTTAAGCCTGCCAACTTGGTAGTTACCAGACGGGGGCAAATTCAACTCATCGATTTTGGTGCTGCAACAGACCTTAGAATCGGAAAGAATTATGTTCCCAATCGTACCCCTTTGGATCGTGACTACTGTCCCCCTGAACTATATGTTCTACCAGAAGAAACCCTGAGTCTTCCACCAGAACCAATTGCAGCTTTCCTTTCACCAATCATGTGGCAGTTAAACAGTCCAGATCTGTTTGATATGTATTCAGCTGGGATTGTACTCCTGCAAATAGCAATTCCAACCTTAAGGTCTTCAGCTGCTTTGAAAAATTTCAATTTGGAGATAAGAACATGTGGATATGATTTGAACAAATGGAGAGCGTCTACTCGCATGAGGTCAGACTTCCAAATTCTTGATAGTGACTCTAGAAGAGGTTGGGACTTGGCAACGAAGCTTATCTCCAAGAGAGGTTCCCAATTAAGAGGACGTTTATCTGCTGCTGCTGCTTTGAGGCATCCTTATTTCCTTCTGGGTGGGGATCAAGCCGCTGCAGTCCTTTCAAAACTAAGCTTTTAG 1497 0.4275 MVSLLHTTATTLQHNHTICFSPPKLSIPITISFSTNRFKSSSGKCNAVFGDIPKDLLETTFHVDHFPVFQSVLVKFQNVTEDLSDVQRWGFLILAGLTWAYLTARPGVLVGAIDAFLLAPMQLVLDSLSGRRNLKRTDFLIGDKLGEGSFGVVYSGVLLPKNVDVQEWIQKNGRGKMTKLNVKSKDKVILKKVKVGIEGAEEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKTNSQFTKGGKWLVWKFEGGRSLADYMADQSFPSNLESTVFGRVLQGVDSSKRNELIIKQIMRQIITSLKKIHDTGIVHRDVKPANLVVTRRGQIQLIDFGAATDLRIGKNYVPNRTPLDRDYCPPELYVLPEETLSLPPEPIAAFLSPIMWQLNSPDLFDMYSAGIVLLQIAIPTLRSSAALKNFNLEIRTCGYDLNKWRASTRMRSDFQILDSDSRRGWDLATKLISKRGSQLRGRLSAAAALRHPYFLLGGDQAAAVLSKLSF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01697 498 Gene3D Transferase(Phosphotransferase) domain 1 277 484 - -
Lapu1g01697 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Lapu1g01697 498 SMART serkin_6 139 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01697 498 Gene3D Phosphorylase Kinase; domain 1 127 249 - -
Lapu1g01697 498 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 40 497 - -
Lapu1g01697 498 ProSiteProfiles Protein kinase domain profile. 139 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01697 498 Pfam Protein kinase domain 283 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01697 498 SUPERFAMILY Protein kinase-like (PK-like) 137 483 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01697 Lapu-Chr1 29891693 29894608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01697 109 336 MAP Kinase Kinase Gene Family AT4G29810 23.581 1.65e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lapu1g01697 Pkinase 3.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01697 - - gmx:100795624 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01697 1 29891693 29894608 Lapu1g01697 1 29891693 29894608 ECH
Lapu10g00750 10 9343608 9347740 Lapu1g01697 1 29891693 29894608 PCT