Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01694 ATGATGCGGAGCATGAATGAGTACTGTGTTTGTGTTCCATTGTTTGTGTGCTTGGTATTGGCAATTGAAGTTGTTGTAGCAAAGGATTTTGAGCCTACAGATAATATCCTGCTGGATTGTGGGGGTCCTCCATCTAGTACTGATACTGATGGCCGTGTGTGGACCACTGATGTTGGTTCCAAGTTTGGTTCCTCCTCTGCAAAATCCACCACCGTATCGCCGGCGGCAACTCAAGACCCTGCCGTCCCCCAGGTGCCCTACATGACGGCACGCGTGTTTCACGCGCCGTTTACCTATGCTTTCCCGGTGGCTTCTGGTTGGAAGTTCCTCAGGCTGCACTTTTACTCGGCTTCTTACTCCAATCTCAATGCATCTGATGCACGTTTTGCGGTGACGGCGAATTCATATACGCTTCTTAGGAACTTCAGTGTTGCTCAGACCACCCTGGCTTTGAATTATGCCTACATTTTGAGGGAATTTGCCATCTATGTAGAAGGGAAAACCTTGAATGTGACTTTCACTCCGTCTACCAATGCATCCAATGCTTACGCGTTTGTTAATGGGATTGAGGTTGTCTCCATGCCTGATATTTATACTTCAACTGATGGAACTACCATGATAGTGGGTACAAATACTGCTTACACCATTGATAACAACACTGCACTTGAGAATGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCTTCCCATGATACCGGTATGTTTAGGTCATGGTCTGATGATGTTCCCTTCCTCTTTGGGGCTGCATTTGGAGTTACAGAGCCTGCTGATCCAGATATGAAGTTTGAGTATCCTCCGGGCAAGCCAACTTATATTGCTCCACTTGATGTCTACACTACGGCCAGATCCATGGGCCCAAATCCCAAGATCAACACAAATTATAACTTGAGTTGGATCTTCAACATTGATTCTGGGTTTTCCTATCTAGTTAGACTCCATTTTGCTGAGGTATCATCAAATATTACCAAGATTAATCAAAGGGTATTTGATATATTCCTCAATAATCAAACAGCTTATCAGGCTGCTGATGTTATTGCCTGGGCAGGCGAATTTAGCCTTTCACATTCTAATGGGGTGCCTGTGCATAAAGACTATGTTGTCTTTGTTCCCGATGGTGAAGAACCACGGCAGGACCTGTGGCTTTCATTGCATCCAGATCCAACTGACAAGCCCATGTATTACGATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAATGATACTGCAGGAAATCTGGCAGGGGCAAATCCTATTCCTCCTCCTGTGCAAGACATAATTGACCCATCAACAGCTAGAGCACATAATCATGGTAAATCAAAGAATCATACAGGCATAATTGCAGGAGGCGTTGCTGGAGGAGTTGTTGTAGTACTTGTGATTGGGCTATTTGCTTTTGCTGCTTCCCGTCGTCGTAGGCAAGGAAAGGATTCTGGTGCAAGTGAAGGGCCATCTGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGTTACGCTTCCTCTCTCCCGTCAAACCTTTGCCGTCATTTCTCATTTGCTGAGATCAAGTCTGCCACAAACAATTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAGGGAGAAATTGATGGTGGAACAATCAAAGTAGCAATTAAACGTGGGAATCCACTATCTGAGCAGGGAGTCCATGAGTTTCAAACTGAGATTGAAATGCTTTCTAAACTTCGTCACCGCCACCTTGTTTCACTGATTGGATACTGTGAAGAAAACACTGAAATGATCCTCGTTTATGATTATATGGCCTATGGAACACTCAGGGAGCATTTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACACACGGGTGCTAAACACACAATCATCCACCGGGATGTGAAGACAACAAACATTTTACTGGACGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCAAAAACAGGTCCAACATTGGATAATACCCATGTAAGTACTGTAGTAAAGGGTAGCTTTGGGTACTTGGATCCAGAATACTTCAGAAGGCAGCAGCTAACTGACAAATCTGATGTTTACTCATTTGGGGTGGTTCTCTTTGAGATATTGTGTGCTCGTCCAGCTTTGAATCCGACCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACCTCAAAGGCATTCTTGACCAAATCATTGATCCCTATCTAAAAGGCAAGATAGCTCCAGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCTGACCAGGGTATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTCCAAGAAAGTGCAGAGGAAAGTGGAAACAGTTTTGGCGGCATTCACAGTGAAGAGGAGCCGATGTATACAGATTCTAAAGGAAAGAAAGACTCTGATCCGATGGGGGGTTATGATGGTAATGTGACTGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACCCCAAGTGCTGTGTTCTCCCAGATCATGAATCCAAAAGGACGTTAA 2706 0.4494 MMRSMNEYCVCVPLFVCLVLAIEVVVAKDFEPTDNILLDCGGPPSSTDTDGRVWTTDVGSKFGSSSAKSTTVSPAATQDPAVPQVPYMTARVFHAPFTYAFPVASGWKFLRLHFYSASYSNLNASDARFAVTANSYTLLRNFSVAQTTLALNYAYILREFAIYVEGKTLNVTFTPSTNASNAYAFVNGIEVVSMPDIYTSTDGTTMIVGTNTAYTIDNNTALENVYRLNVGGNDISPSHDTGMFRSWSDDVPFLFGAAFGVTEPADPDMKFEYPPGKPTYIAPLDVYTTARSMGPNPKINTNYNLSWIFNIDSGFSYLVRLHFAEVSSNITKINQRVFDIFLNNQTAYQAADVIAWAGEFSLSHSNGVPVHKDYVVFVPDGEEPRQDLWLSLHPDPTDKPMYYDAILNGVEIFKINDTAGNLAGANPIPPPVQDIIDPSTARAHNHGKSKNHTGIIAGGVAGGVVVVLVIGLFAFAASRRRRQGKDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTIKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYLKGILDQIIDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGNSFGGIHSEEEPMYTDSKGKKDSDPMGGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01694 901 Gene3D Phosphorylase Kinase; domain 1 504 619 - -
Lapu1g01694 901 SMART serkin_6 543 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01694 901 CDD STKc_IRAK 549 815 - -
Lapu1g01694 901 MobiDBLite consensus disorder prediction 860 894 - -
Lapu1g01694 901 MobiDBLite consensus disorder prediction 827 901 - -
Lapu1g01694 901 ProSiteProfiles Protein kinase domain profile. 543 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01694 901 PANTHER OS03G0124300 PROTEIN-RELATED 11 485 IPR046957 GO:0004672
Lapu1g01694 901 FunFam Receptor-like protein kinase FERONIA 620 830 - -
Lapu1g01694 901 FunFam FERONIA receptor-like kinase 35 195 - -
Lapu1g01694 901 Pfam Protein tyrosine and serine/threonine kinase 549 811 IPR001245 GO:0004672|GO:0006468
Lapu1g01694 901 ProSitePatterns Protein kinases ATP-binding region signature. 549 572 IPR017441 GO:0005524
Lapu1g01694 901 FunFam Receptor-like protein kinase FERONIA 515 619 - -
Lapu1g01694 901 Gene3D Transferase(Phosphotransferase) domain 1 620 833 - -
Lapu1g01694 901 Gene3D - 35 195 - -
Lapu1g01694 901 Gene3D - 220 416 - -
Lapu1g01694 901 FunFam FERONIA receptor-like kinase 220 416 - -
Lapu1g01694 901 MobiDBLite consensus disorder prediction 839 853 - -
Lapu1g01694 901 SUPERFAMILY Protein kinase-like (PK-like) 517 816 IPR011009 -
Lapu1g01694 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Lapu1g01694 901 Pfam Malectin-like domain 38 415 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01694 Lapu-Chr1 29873931 29877466 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01694 19 901 Receptor kinase-like Gene Family AT3G51550 74.011 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g01694 Malectin_like 1.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01694 - - gmx:100499644 1626.3