LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu1g01685	ATGCCGGCTCTGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTCTTATCACCTTCATAGCAGCATCAGAACGAACAGACCCTTCAGAAGTTAATGCGCTGATAGACATCAAGAAAAGTTTGATTGATCCTAAGAACAATCTTAAGAAATGGAATAAAGGAGACCCATGTTCAAGAAAGTGGACTGGGGTTTGGTGTTTTGATAAGACGGGGGCTGATGGGTACTTCCATGTTCGTGAGATCTACTTAATGACAATGAATCTCTCGGGAAGTCTATCACCTCAGCTTGGTCAGCTATCCCATCTCGAGATAATGGATTTCATGTGGAACAATCTGACAGGCCCGATACCGAAGGAGATTGGAAATATTAAATCATTGAAACTCTTGCTCCTGAATGGCAATAAGCTATCTGGGAGTTTACCAGACGAGCTTGGCAACCTTCCAGATTTAAATAGATTCCAAGTTGATGAAAACCAGTTGTCTGGTTCTATACCAGAGTCACTTGCCAACATGGTCAATGTTAAACACCTTCACCTGAACAACAACTCATTTAGTGGTCAACTTCCATCCACACTTTCAAAGCTATCAAATCTGATGCATTTGCTTGTGGACAACAATAACTTATCTGGCAATCTTCCACCAGAATACTCCATGCTACGTGGATTGGCAATACTCCAGCTTGATAACAACAACTTCAGCGGGAATGGAATTCCTTCGACCTATGCAAACTTAACCAGGCTAGTGAAATTAAGTCTAAGAAACTGCAGTCTGCAAGGAGCTGTTCCTGATTTCAGTTCAATACCCCAGCTTACCTATTTAGATCTTAGCTGGAATCAGTTCACTGGACCCTTGCCGTCAAATAAACTGCCAGACAATATGACAACTATTGATTTGTCCAATAATCGTCTCAACGGATCTATTCCTCGAGGCTACTCTTATCCTCATCTCCAAAAATTGTCACTTGCGAACAATTTACTTTCGGGGTCCATCCCTGCTAGCATATGGCAGAACATGTCCTTCAGTGTGAAAGATAAACTTATAATTGATCTCCATAACAACTCATTTGAGGATGTTTTGGGAAATCTGAACCCCCCGGCAAATGTTACCTTGAGGCTTTCTGGTAATCCTATCTGCAAGAATTCTAACACACAAACTGTTGGTCAATATTGTGGACCTGAAGGAGATAAGGCAGCCCAAGACATGACAAACTCTACTGTCTGTCCTATTCAATCTTGTCCAGTGGATGAATTTTATGAATACGCCCCTTCTTCACCAGTTCCTTGCTATTGTGCGGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTGCTCCCTATAGATCTAGTTTTGAACACTACATAATTGATGCCTTAAAATTACACCTCTACCAACTATCAGTAGATTCGGTTGCTTGGGAAGAGGGACCTCGTCTTAGAATGTATTTGAAACTCTTCCCTTCCTATAATGATTCCCGTTCTAATGTGTTCAATGAAAGTGAGGTCCGTCGCATTAGCAGCATATTTACATCATGGCGATTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTTGGACCTTATGAAAATATAATTCTTGGTTCGGAGAAGGGAAAAGTTAGTGTTGGCATAAAAGTTGCTGTTGTAATAGCAGCTGCTGCTTGTGCTTTAGCAATATCTGCAATAATCATTCTCTTGATTACTAGAAGAAACATGAAATACCAGAAGAAGATTTCCAGGAAACCTACTAGTATATCTATCAAAATAGATGACATGAAAGCATTTACTTACAAAGAACTGGCTCTAGCTACTAACAAATTTAATATCTCAACTAAAGTTGGTCAAGGAGGTTATGGGAATGTCTACAAAGGCATTTTATCTGATGAAACTTTTGTGGCCGTTAAGCGAGCAGAAGCAGGTTCCTTACAAGGACAAAGGGAGTTTTTGACTGAGATTGAGCTTTTGTCAAGATTACATCATCGAAATCTTGTCTCGCTGATTGGATATTGTAATGAAGAAGGGGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACTCTAAGAGACTGGATTTCTGGTAGAAATAGAAAAACCAAGGGAAGCCTAAATTTTAGTACGAGGTTGAGAATTGCAATGGGAGCAGCCAAAGGCATACTGTATCTGCATACAGAGGCTAACCCTCCTATATTCCACAGGGATATTAAAGCCAGTAACATTCTTCTGGACTCCAACTTTACAGCAAAAGTGGCTGATTTTGGACTGTCACGGCTTGTACCAGACTTAGATGAAGAAGGAACTGCTCCTAAATATGTGTCAACAGTTGTGAGAGGAACTCCAGGCTACCTGGATCCAGAATATTTGTTGACTCATAAGCTGACAGACAAATGTGATGTCTATAGCCTGGGAATTGTGTATCTAGAGCTTTTGACAGGCATGCAACCAATATCTCATGGGAAAAACATTGTCCGCGAGGTTAATATGGCTCATCAATCTGGCACAGTATATTCCATCATAGACAGCAGAATGGGTTTGTATACATCTGAATGCTTGGACAAATTTTTAACTCTGGCCCTCAGTTGTTGCCAAGACAATCCAGAGGAGAGGCCATCAATGGTAGAAGTGGTGAGGAAACTGGAAGATATCATTGCAATGTTGCCCGAAGCTGAAACTCTTTTCTCAGATGTTAGCTTAGACAATTCTGGCAACATAGCACCACCCTCATCATCAGCATCAATATCAGGATCCCATGTGACAAGGGAGGAGCAACATATGTCCTCATATGTCTCAGGAAGCGATCTTGTCAGTGATGTCATTCCCACCATTGTTCCTCGCTGA	2871	0.4117	MPALRIHGYALAVSFCLITFIAASERTDPSEVNALIDIKKSLIDPKNNLKKWNKGDPCSRKWTGVWCFDKTGADGYFHVREIYLMTMNLSGSLSPQLGQLSHLEIMDFMWNNLTGPIPKEIGNIKSLKLLLLNGNKLSGSLPDELGNLPDLNRFQVDENQLSGSIPESLANMVNVKHLHLNNNSFSGQLPSTLSKLSNLMHLLVDNNNLSGNLPPEYSMLRGLAILQLDNNNFSGNGIPSTYANLTRLVKLSLRNCSLQGAVPDFSSIPQLTYLDLSWNQFTGPLPSNKLPDNMTTIDLSNNRLNGSIPRGYSYPHLQKLSLANNLLSGSIPASIWQNMSFSVKDKLIIDLHNNSFEDVLGNLNPPANVTLRLSGNPICKNSNTQTVGQYCGPEGDKAAQDMTNSTVCPIQSCPVDEFYEYAPSSPVPCYCAAPLRIGYRLKSPSFSYFAPYRSSFEHYIIDALKLHLYQLSVDSVAWEEGPRLRMYLKLFPSYNDSRSNVFNESEVRRISSIFTSWRFPRTDFFGPYELLNFTLLGPYENIILGSEKGKVSVGIKVAVVIAAAACALAISAIIILLITRRNMKYQKKISRKPTSISIKIDDMKAFTYKELALATNKFNISTKVGQGGYGNVYKGILSDETFVAVKRAEAGSLQGQREFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLRDWISGRNRKTKGSLNFSTRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSNFTAKVADFGLSRLVPDLDEEGTAPKYVSTVVRGTPGYLDPEYLLTHKLTDKCDVYSLGIVYLELLTGMQPISHGKNIVREVNMAHQSGTVYSIIDSRMGLYTSECLDKFLTLALSCCQDNPEERPSMVEVVRKLEDIIAMLPEAETLFSDVSLDNSGNIAPPSSSASISGSHVTREEQHMSSYVSGSDLVSDVIPTIVPR*	957

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu1g01685	956	Gene3D	Ribonuclease Inhibitor	265	410	IPR032675	-
	Lapu1g01685	956	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	741	753	IPR008271	GO:0004672\|GO:0006468
	Lapu1g01685	956	Gene3D	Ribonuclease Inhibitor	196	264	IPR032675	-
	Lapu1g01685	956	ProSiteProfiles	Protein kinase domain profile.	618	894	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu1g01685	956	Pfam	Leucine rich repeat N-terminal domain	29	67	IPR013210	-
	Lapu1g01685	956	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g06840	29	190	-	-
	Lapu1g01685	956	Gene3D	Phosphorylase Kinase; domain 1	579	693	-	-
	Lapu1g01685	956	SMART	serkin_6	618	894	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu1g01685	956	Gene3D	Transferase(Phosphotransferase) domain 1	694	904	-	-
	Lapu1g01685	956	SUPERFAMILY	L domain-like	44	380	-	-
	Lapu1g01685	956	CDD	STKc_IRAK	624	893	-	-
	Lapu1g01685	956	ProSitePatterns	Protein kinases ATP-binding region signature.	624	646	IPR017441	GO:0005524
	Lapu1g01685	956	FunFam	Leucine-rich repeat protein kinase family protein	582	693	-	-
	Lapu1g01685	956	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	694	906	-	-
	Lapu1g01685	956	PANTHER	RECEPTOR-LIKE PROTEIN 55	38	893	-	-
	Lapu1g01685	956	SUPERFAMILY	Protein kinase-like (PK-like)	603	909	IPR011009	-
	Lapu1g01685	956	Pfam	Protein kinase domain	619	888	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu1g01685	956	Gene3D	Ribonuclease Inhibitor	28	193	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu1g01685	Lapu-Chr1	29781213	29790864	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu1g01685	5	902	Receptor kinase-like Gene Family	AT5G01950	60.442	0.0	1091

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Lapu1g01685		Pkinase	1.4e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu1g01685	-		-	gmx:100815005	1613.59