Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01669 ATGGAAAACCAGGGGGGAGAGTTGTGTTTCCGAGTTGTAATATTTGGTATGAGTTGTACCCTTTCTATGGCCTCATCACGGATAATCCACCAGAAAGACTCTCTCCATCACCAGGTTTTTCTTCTTCTTCTTCTTCTTCGAAAAGGTCGATCACGAACTATTATCTTGATCCTTACCTCGACCATTATTTTATTGGGACTATGTTTCACCATTTGTTATTATTTGATGCAACGAAAAACAAGAAAGAGTAATAAAGTTATACTCATAGAAAATTTTGGACTTGAAAGTTCCACTATAGAGTCATTGCAATTCAATTTGGCAATAATTGAAGCAGCAACAAACAACTTTGCAGATGAGAATAAAATAGGTCAAGGTGGATTCGGAGAAGTTTACAAGGGCATTCTAGTTGATGGAACATCTATAGCAGTAAAAAGACTTTCAAGAAATTCTAAGCAAGGTTTAGAGGAGTTTAAGAATGAGGTTATGTTGGTAGCTAAACTCCAACATAGAAATTTAGTGACTTTCACCGGATTTTGTCTTGATGAGCAAGAAAAAATACTTATCTATGAATATGTATCAAACAAGAGTTTGAACTACTTCTTATTTGATGCTAATCAAGAAAAGTGTTTGACTTGGTCTGAGCGTTACAAAATAATAGAAGGGATTGCTCGAGGAATTCTATATTTACACGACCATTCTCGACTTAAAGTTATACATCGAGATCTCAAACCTAGTAATATACTATTAGATGAAAATATGAATCCAAAAATTTCAGATTTTGGTCTTGCTAAAGTTGTTGAAAAAGATCAACAAGAAGGAAGTACAAAGAGAATTACTGGAACATATGGTTATATGTCTCCAGAGTATGCTACATTTGGACAATTTTCTGACAAATCAGATATTTACAGTTTTGGAGTTATGGTTCTCGAGATTATTAGTGGAAAAAAGAACATAGGTTCATATGAACCACATCGTATAGTTAATTGTCTCCTAAATTTTGTGAGTTTGGGAACACTGGAGGGATGA 1026 0.3431 MENQGGELCFRVVIFGMSCTLSMASSRIIHQKDSLHHQVFLLLLLLRKGRSRTIILILTSTIILLGLCFTICYYLMQRKTRKSNKVILIENFGLESSTIESLQFNLAIIEAATNNFADENKIGQGGFGEVYKGILVDGTSIAVKRLSRNSKQGLEEFKNEVMLVAKLQHRNLVTFTGFCLDEQEKILIYEYVSNKSLNYFLFDANQEKCLTWSERYKIIEGIARGILYLHDHSRLKVIHRDLKPSNILLDENMNPKISDFGLAKVVEKDQQEGSTKRITGTYGYMSPEYATFGQFSDKSDIYSFGVMVLEIISGKKNIGSYEPHRIVNCLLNFVSLGTLEG* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01669 341 Gene3D Transferase(Phosphotransferase) domain 1 192 338 - -
Lapu1g01669 341 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 77 191 - -
Lapu1g01669 341 Gene3D Phosphorylase Kinase; domain 1 76 191 - -
Lapu1g01669 341 SUPERFAMILY Protein kinase-like (PK-like) 96 332 IPR011009 -
Lapu1g01669 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lapu1g01669 341 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Lapu1g01669 341 ProSiteProfiles Protein kinase domain profile. 116 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01669 341 FunFam Lectin-domain containing receptor kinase A4.3 192 336 - -
Lapu1g01669 341 Pfam Protein kinase domain 117 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01669 341 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 324 - -
Lapu1g01669 341 SMART serkin_6 116 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01669 Lapu-Chr1 29573449 29577869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01669 1 322 Receptor kinase-like Gene Family AT4G05200 49.003 1.37e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g01669 Pkinase 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01669 - - gmx:100804650 462.611