Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01668 ATGTCTCCAGAGTATGCCATGTTTGGACAATTTTCTGAGAAATCTGATGTTTACAGTTTTGGTGTTATGATTCTTGAAATTATTAGTGGAAAAAAGAATATTAGTTCACATGAATTAGATCGTGTTGGTGATGGTCTTCTAAAATTTGTTTGGAGACATTGGAGGGATGAAACAACATTGAACACATTGGATCCAAAATTAAAAGAAAATTATTCTAACATTGAAGTCATGAGATGCATTCAAATTGGTCTATTATGTGTTCAAGAAAATCCAAATGAGAGACCTACAATGGTAACAATTGTTTCATATCTTAATAGTCACACAATTGAGTTGCCATCTCCACAAGAACCAACATTTTTCTTAAACCTTAGAAATCCAATTGTTGCACATGAATCAAGTTCAGGCCAAGATGCCAATAGTTCCATACCATCTTCTAACAATGACATATCTATAAGTGAATTTTATCCTCGATAG 474 0.327 MSPEYAMFGQFSEKSDVYSFGVMILEIISGKKNISSHELDRVGDGLLKFVWRHWRDETTLNTLDPKLKENYSNIEVMRCIQIGLLCVQENPNERPTMVTIVSYLNSHTIELPSPQEPTFFLNLRNPIVAHESSSGQDANSSIPSSNNDISISEFYPR* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01668 157 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01668 157 SUPERFAMILY Protein kinase-like (PK-like) 1 142 IPR011009 -
Lapu1g01668 157 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Lapu1g01668 157 Pfam Protein tyrosine and serine/threonine kinase 1 104 IPR001245 GO:0004672|GO:0006468
Lapu1g01668 157 MobiDBLite consensus disorder prediction 131 157 - -
Lapu1g01668 157 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01668 Lapu-Chr1 29560529 29561122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01668 1 157 Receptor kinase-like Gene Family AT4G23140 50.000 4.76e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g01668 PK_Tyr_Ser-Thr 5.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01668 - - pvu:PHAVU_008G077500g 270.011