Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01667 ATGAACAGAAGCATGACCTGGAATCCCTTGAAGCTCATCTTCCTTTCGATTACCTTCTTCAGTTTCGCAACTGGTAAAGCAAAGGGCGCGGACCTTGATTATTTTGCCCGATCATGCAGTGAAGACAGAAGCAGTGATAACAGCCCTTATCACAGGAATCTGAGGACCCTCCTCTCTTCCTTCTCTTCCAACGCCACCGCCAACGCCAACGGATTCTACAACAATACAATCCTTGGCACAAACTCCTCTGACACAGTATATGGTCTTTTCATGTGCAGGGGTGATGTACGCTCTCTCGGCTGCAAAGATTGCGTCGCAAATGCAACCCACACTCTATCTTCAGACACAAACTGTTCCCTGTCCAACTCGGCTGTGATCTGGTATGAAGACTGCATGGTTCGCTATTCCAACCGCTCTTTCTTCTCCACTGTTGACAAAGCTCCCGGATTTTACCAGTCGAACATGGCCAATATCTCCTCCAACTCATCAAGCGTCACGAGCTTCATGAGCTTGTTGGCCACCACCATTACAGAAACTGCACACGAAGCAGCCAATTCTAGTTACAGATATTCCACAAAGCAACAAAACTTCTCTGAAATTTCGACCCTTTACTGTCTAGCTCAGTGTACACAAGACCTTTCACTCCAACAATGCTCAGACTGTCTTGATTCAGCAATATCAGATATTCCATTTTGCTGTGATGGAAAGATGGGAGGAAGAGTTGTGTATCCCAGTTGTAACATTAGGTATGAATTCTACCCTTTCTACCTTGTCACCAATGAGGCAACAAAAGGACTCGTCCCAGAAACAAAATATGCACACAGAGATTCTGAATATTCAGAAGATCCCGGCTATATTTCTCACAACTGCTCAAGCAACAAAACTGACGCTGCTTTCCAATCAAACCTCAGAACCCTCCTCTCCGGCTTGTCTTCCAACGCCTCCTATGGATTCCAGGCGTCAGAGGGAACAGCGTATGGCCTCTTCAGGTGCCGTAAGGACATTCCTCTTCGCCTCTGTGAACAATGCATCCAAAACGCAACGGACAAAATAACCTCCAATTGTGGTTTGGCTTCTACGGAGGCCGTAATATGGTACAATCACTGCTGGCTTCGCTACTCCGACAGAAACTTCTTCTCCAGCATGGAAACAAGTCCCCGATTTCGAGATCTGAATATCAGCATCACCAATCCGATAAAGTCCTCCGTTGCTTCTGAATTATCGAACCAGGTTGCTAAGGTGGCTATCATGACAGGGAACACTGAAGACAAATTCCAAACAGATGAATCACTGAGATTGAATGATGAGCAAAGAGTGTATATTCTTGGTCAATGCTCACAGGATCTATCAACCAATAGTTGCATTGGGTGCCTAAGTGACGTGATGGGAACAGCAATTTCATGGAGCAGTTTGGGAAGCGTGGGTGGACGAGTTCTGTATCCTAGCTGTATTCTTCGCTTTGAATTGTTCCAGTTTTACAGTCTCACGCCGCCACCAACTGCTACTCTTCCTCCACCAGTTGGACAAGAAATTTCCACTATAGAGTCATTGCAATTCAATCTGCCAATAATTGAAGCAGCAACAAGTAATTTCTCTCATGAGAACAAAATCGGCAAAGGTGGATTTGGAGAAGTTTATAAGGGCATGCTTTATGATAGCCGATCTATTGCTGTAAAGAGACTTTCAACAAATTCTAAGCAAGGCATACAAGAGTTCAAAAACGAGGTTCTATTAATAGCCAAACTTCAACATAGGAATCTAGTGGCATTTATAGGATTTTGTCTTGATGAAAAAGAAAAAATACTTATTTATGAATATGTACCAAACAAGAGTTTAGACCACTTTTTATTTGATACTAAACAAGAAAAAGTTTTGAGTTGGATCGAGCGTCACAAAATCATTGGTGGAATTGCTCGAGGAATTGTATATTTACATGAACATTCTCGACTTAAAGTTATACATCGCGATCTTAAACCTAGCAATGTACTACTAGATGAAAATATGAATCCTAAAATTTCAGATTTTGGACTTGCTAGAATTGTTGAAATAGATCAAAAGGAGGAAACTACAAAAAGAATTATTGGAACATAG 2091 0.4247 MNRSMTWNPLKLIFLSITFFSFATGKAKGADLDYFARSCSEDRSSDNSPYHRNLRTLLSSFSSNATANANGFYNNTILGTNSSDTVYGLFMCRGDVRSLGCKDCVANATHTLSSDTNCSLSNSAVIWYEDCMVRYSNRSFFSTVDKAPGFYQSNMANISSNSSSVTSFMSLLATTITETAHEAANSSYRYSTKQQNFSEISTLYCLAQCTQDLSLQQCSDCLDSAISDIPFCCDGKMGGRVVYPSCNIRYEFYPFYLVTNEATKGLVPETKYAHRDSEYSEDPGYISHNCSSNKTDAAFQSNLRTLLSGLSSNASYGFQASEGTAYGLFRCRKDIPLRLCEQCIQNATDKITSNCGLASTEAVIWYNHCWLRYSDRNFFSSMETSPRFRDLNISITNPIKSSVASELSNQVAKVAIMTGNTEDKFQTDESLRLNDEQRVYILGQCSQDLSTNSCIGCLSDVMGTAISWSSLGSVGGRVLYPSCILRFELFQFYSLTPPPTATLPPPVGQEISTIESLQFNLPIIEAATSNFSHENKIGKGGFGEVYKGMLYDSRSIAVKRLSTNSKQGIQEFKNEVLLIAKLQHRNLVAFIGFCLDEKEKILIYEYVPNKSLDHFLFDTKQEKVLSWIERHKIIGGIARGIVYLHEHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVEIDQKEETTKRIIGT* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01667 696 ProSiteProfiles Gnk2-homologous domain profile. 281 378 IPR002902 -
Lapu1g01667 696 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 13 260 - -
Lapu1g01667 696 Pfam Salt stress response/antifungal 415 488 IPR002902 -
Lapu1g01667 696 Pfam Salt stress response/antifungal 290 375 IPR002902 -
Lapu1g01667 696 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Lapu1g01667 696 Pfam Salt stress response/antifungal 161 252 IPR002902 -
Lapu1g01667 696 Pfam Protein kinase domain 532 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01667 696 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Lapu1g01667 696 SMART serkin_6 531 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01667 696 Gene3D Phosphorylase Kinase; domain 1 507 606 - -
Lapu1g01667 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Lapu1g01667 696 ProSiteProfiles Protein kinase domain profile. 531 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01667 696 ProSiteProfiles Gnk2-homologous domain profile. 384 492 IPR002902 -
Lapu1g01667 696 ProSiteProfiles Gnk2-homologous domain profile. 150 255 IPR002902 -
Lapu1g01667 696 ProSiteProfiles Gnk2-homologous domain profile. 32 140 IPR002902 -
Lapu1g01667 696 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 607 696 - -
Lapu1g01667 696 FunFam Cysteine-rich receptor-like protein kinase 25 150 255 - -
Lapu1g01667 696 SUPERFAMILY Protein kinase-like (PK-like) 509 695 IPR011009 -
Lapu1g01667 696 Gene3D - 283 378 IPR038408 -
Lapu1g01667 696 Gene3D - 390 492 IPR038408 -
Lapu1g01667 696 Gene3D - 150 255 IPR038408 -
Lapu1g01667 696 Gene3D - 31 140 IPR038408 -
Lapu1g01667 696 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 140 - -
Lapu1g01667 696 Gene3D Transferase(Phosphotransferase) domain 1 607 696 - -
Lapu1g01667 696 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 500 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01667 Lapu-Chr1 29557484 29560437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01667 280 696 Receptor kinase-like Gene Family AT4G05200 39.837 1.83e-108 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g01667 Pkinase 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01667 - - pvu:PHAVU_008G077500g 1097.03