Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01663 ATGGCTGCTTGTGCTTTGTTCAGTGGTGGCACCAACATTACCGAAGATGGCAATGTTAACAACGGAAGTGGAAGTGCTGCTAGTCCTCTGACAAGTGCATCTAACTCTAGCAACATGAGCAACGAGGAGCAACACAACCTACATGGCATCATGCCACAGTCTCATTGTGAGAGAAAAATGGTGAGGAAAAGAATGGCTTCTGAGATGGACCAAGTTAACGTTCATGTCACTCCACCGCACAACTCTTCCTCCACCACTGATTATCCTAGGTTTCCTCGTCGAAGCACCACCAACATGAACATGTCATCCTTAGAAAAAGGGTCCACCACCACAGCTACGTTAGCCGCAGGTACTTGTAGTAATAGCAATAATAATAATAATAATAACTATCATTTTAATAATAGTAACCATAATAGTAACAGTAGTAGTATTTCGTCAAGAGATAACGTTGCTATTCCACATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCACCACCATCAATCCCTCTGGTGTTGCTCCAAACTACAGTGCTCACCAACACCATCATTTTCAAGGACTTGTTGAAAGTCAAAGCCAGGACCAGCAAAGCCCCGTGCCTGCAGTGTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGGAACCGAGACAACAACAACACCACCACCACCACCAACATAAGAAGCGGTGGTGGAAATATTGTCGACGTGGTTGCTTCTTCTTCTTCTCCTTCCATGGATGACACTTCAGCCGCGACAAGTAGTTGGATCGATGGCATATTGAAGGATCTCATTCACAGTTCAAACAGTGTTTCGATTCCCCAACTCATCAGCAACGTGAGGGAAATTATTTACCCTTGCAACCCCAACCTCGCAACGGTTCTTGAATACAGGTTGCGTCTTCTCACTGAGTCTACCCCACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCTGCTTCTGGGTCCTCGGTGAAGATCATGAATAATCGTGTGGATGGCATTGTTCCTAATTTGCACTTCACAGATGCATCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCCAATCACTCAACACCATGATAACAACGGTAACACCAACACCAACACCAACAATAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCGCCACCACCACCCCATTATTCACCCCCACAAGAGAAGCAGTCTCACCCTCAAGAGGAAGATCTAGCAGCAACCAGCACTGCTGAGGTGGCACTCACAAGAAAGAAGAAAGAAGAGTTGCGGGAACAGAAGAAGAAAGATGAGGAGGGTCTGCATCTCCTCACTTTGCTGCTTCAGTGTGCAGAAGCTGTTTCAGCTGAGAATCTAGAAGACGCCAACAAGATGTTGCTAGAGATTTCCCAATTGTCAACACCGTTTGGCACATCAGCCCAGCGTGTGGCCGCTTATTTCTCAGAAGCCATATCAGCAAGGTTGGTGAGTTCATGTTTGGGGATATATGCCACTTTGCCACACACCCATCAAAGCCACAAGGTGGCATCGGCTTTCCAAGTGTTCAATGGTATCAGTCCTTTCGTGAAGTTCTCGCACTTCACTGCAAACCAAGCTATCCAAGAAGCTTTTGAGAGGGAAGAGAGGGTGCACATCATAGATCTGGATATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTCTACATTCTAGCTTCAAGACCTGGTGGAGCCCCTTATGTGAGGCTCACGGGGCTTGGTACCTCCATGGAAGCACTTGAAGCCACGGGTAAACGGTTGTCTGATTTTGCAAACAAACTTGGCCTTCCCTTTGAGTTCTTCCCAGTGGCTGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTAGCAAAACCGAAGCTGTTGCAGTTCACTGGTTGCAACATTCCCTCTATGATGTCACCGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTGGCACCTAAAGTGGTGACTGTGGTAGAGCAAGACCTAAGCAACACTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCCGCGTTATTTGACTCTCTTGGGTCTAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAACAGCAGCTATTGTCTAGGGAGATTCGCAATGTGCTAGCTGTTGGGGGGCCGTCAAGAACTGGAGAGCCAAAGTTTCACAATTGGAGGGAGAAGTTTCAGCAGTGTGGATTTAGAGGTATATCTTTAGCTGGTAATGCTGCCACTCAAGCTAGTCTACTCCTTGGTATGTTCCCATCTGAGGGCTATACCTTGGTGGAGGACAATGGCATCCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCACCTTTCCATAGTGGCACTGCCATTACCCATCACAACTAG 2475 0.4752 MAACALFSGGTNITEDGNVNNGSGSAASPLTSASNSSNMSNEEQHNLHGIMPQSHCERKMVRKRMASEMDQVNVHVTPPHNSSSTTDYPRFPRRSTTNMNMSSLEKGSTTTATLAAGTCSNSNNNNNNNYHFNNSNHNSNSSSISSRDNVAIPHYPTVTVTTNYSTMLLPSSTTINPSGVAPNYSAHQHHHFQGLVESQSQDQQSPVPAVCGFSGLPLFPSQSQRNRDNNNTTTTTNIRSGGGNIVDVVASSSSPSMDDTSAATSSWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLATVLEYRLRLLTESTPQNKRGTEGVPLPASGSSVKIMNNRVDGIVPNLHFTDASGGAVVVNQHMLSNWGVPPITQHHDNNGNTNTNTNNNPSVSLVTLPSPPPPPHYSPPQEKQSHPQEEDLAATSTAEVALTRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFYILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKFQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHSGTAITHHN* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01663 824 MobiDBLite consensus disorder prediction 11 43 - -
Lapu1g01663 824 MobiDBLite consensus disorder prediction 372 428 - -
Lapu1g01663 824 MobiDBLite consensus disorder prediction 1 43 - -
Lapu1g01663 824 Coils Coil 425 445 - -
Lapu1g01663 824 ProSiteProfiles GRAS family profile. 446 811 IPR005202 -
Lapu1g01663 824 MobiDBLite consensus disorder prediction 398 413 - -
Lapu1g01663 824 MobiDBLite consensus disorder prediction 372 397 - -
Lapu1g01663 824 Pfam GRAS domain family 456 811 IPR005202 -
Lapu1g01663 824 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 412 806 IPR005202 -
Lapu1g01663 824 MobiDBLite consensus disorder prediction 219 244 - -
Lapu1g01663 824 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01663 Lapu-Chr1 29502083 29507327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01663 437 814 GRAS Transcription Factor Family AT5G41920 55.013 1.83e-140 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu1g01663 GRAS 3.2e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01663 - - gmx:100806779 1303.5