Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01652 ATGAGTGGTGGTAGCAGCAATAATAATACTGGTAGTCCTTGTGGGGCTTGCAAGTTTCTCCGGAGGAAATGTGTTCCGGGTTGTATCTTTGCTCCTTACTTTGATGCAGAGCAAGGTACAACCCATTTTGCGGCTGTTCACAAGGTTTTTGGGGCTAGTAATGTGTCCAAGCTTCTCCTTAGCATTCCTCTCCATAAGAGGCTTGATGCAGTTATCACCATTTGTTATGAAGCACAATCACGCCTCAGAGATCCTGTTTATGGCTGTGTTTCGCACATCTTTGCCCTTCAGCAACAGGTGGTGAGCTTACAAGCAGAACTCTCATACCTACAAGGCCACCTTGCTCAAATGGAGGTACCTCAACCACCAGCACCTCCTCCGCCACAATCGGTGGCGGCACCACCAGCACCTTTCTCAATGGCTGATCTACCGTCGGCGACTGCGGCGGCAGCGGCGGCCAGCACTTATGATTTGTCTTCACTTTTTGATCCAACGGGGCAAGTATCATGGGCCATGCAACACAGGGCCATTGACCCACGTCAATACGTGGCGGCAACTCCATCAACTTCTACTAGGGCTATCGTTCAGGCTGTGGCACGTGACCTTCCTCACAGACATGGCTCTCCTCCATCACCTCCTGCATCAAGCTCCAATGCTTCACCATCTCTATCCCTTTCTAAATGA 684 0.5058 MSGGSSNNNTGSPCGACKFLRRKCVPGCIFAPYFDAEQGTTHFAAVHKVFGASNVSKLLLSIPLHKRLDAVITICYEAQSRLRDPVYGCVSHIFALQQQVVSLQAELSYLQGHLAQMEVPQPPAPPPPQSVAAPPAPFSMADLPSATAAAAAASTYDLSSLFDPTGQVSWAMQHRAIDPRQYVAATPSTSTRAIVQAVARDLPHRHGSPPSPPASSSNASPSLSLSK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01652 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 130 - -
Lapu1g01652 227 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Lapu1g01652 227 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
Lapu1g01652 227 MobiDBLite consensus disorder prediction 118 138 - -
Lapu1g01652 227 MobiDBLite consensus disorder prediction 119 134 - -
Lapu1g01652 227 MobiDBLite consensus disorder prediction 198 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01652 Lapu-Chr1 29401332 29404414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01652 16 227 AS2 family AT2G45420 57.456 2.68e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu1g01652 LOB 2.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01652 K21994 - gmx:100790517 314.694