Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01649 ATGGCGTCGAACCGAAACGGCGTCCAAAGAGGAAGCGCCAAGTTCGATCGCCCTCTCAAGCCCCGGCCCCGTCCCTCCTCCCCTTCGCCGGGATCCGCCCTTCGCCGCACCACTCCTGCTGCCAGAAACGCGGACGCCGTGCCTGGAAGAGTACGGGTGGCTGTAAGATTGAGACCAAGAAATGCTGAAGAAATGATGGCAGATGCTGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGTAGAAACAATTGGGATTCAGACACGTATGAGTTTGATGAGGTGCTTACCGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACACTTGGACGACTAGGGGAAGTTGATACTTCTGATCGTGGTATCATGGTCCGTTCCATGGAGGATATTTTTGCTGACCTGTCACCCAATACTGATTCTGTCACAGTCTCATATCTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGCAAATGATAATATTCCTATAGTGGAAGATCCAAGAAGTGGTGATGTATCTATGCCTGGGGCAACTCTTGTAGAAATCACAGACCAACATAGTTTTTTGGAGTTGTTAAGAGTAGGGGAAGCTAATCGAATTGCTGCTAACACAAAACTGAATACTGAATCTTCTCGCAGTCATGCTATTCTGATGGTTCATATTAAGAGGTCTGTCTTGGAAAGTGAAGATATTGTACCTAGTCAAAATGGCGATGCCTCTCATTTGACTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCGGGTTCAGAACGTGTCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGGATGCTTCGAGATTCTTTTGGTGGCACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCACCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAATTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTACAATTAGATAAGCTTATTGCAGAGAATGAAAGACAGCAGAAAGCTTTTGAGGATGAAGTTGAGAAAATAAATTTGGAGGCACAATGTCGAATTACTGAGGTTGAGAGGAACTTTGCAGATGCATTGGAGAAAGAGAGACTGAAATGCCAGATGGAGTACATGGAATTGGTAAAAGAGCTGGAGCAGAAGTTGGTATTGAATCAAGAAAGACATGACTGCAATAGTTCTGTGGCTGATAATGGAGAGGGGCCCACATCGTCTTCAGCAGGTGAAGTTATCGAGGTCAAAATGCTGCTTGAAACTGAAAGAAGTCGGAGGAAGGCAGCTGAAGAAGAGGTAGAGCATCTAAAAAATCAGCTGGGGAAGCACACACAAACACAGGCTGGAGATGTGGAGATTATAAAGCTTCGTAACATCTTGGAGGATGAGGCTAATCAGAAAAAAAGACTCGAAGAAGAAATAATAATACTGAGAAGTCAATTATTGCAATTGAACTTTGAAGCTGACCAGATGAGAAGGTGTCTGGAAAATGGAAGCTCTGGGAGCACATTTTCTGCTATGGATTCCTCCCGGCATTCCCAATTCAAGGACACTGCAAACGGTCAGAAGTCATCTGTTGCTACACTCTTTGAACAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTAGCCAACCTAGCAGCCGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGGGGCCTTACTTCGTTGCTGATGCTTCTTCGAAGATACGAGGATGAAACTGTTCGCAGGGTAGCGGCAGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAATCAAGAACTTATTATGGCTGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGTGCAATTGCTAACTTATGTGGAAATGATAGAATATTGATGACACTGAGATCCCAGGGAGGTATAAAGGCTTTACTGGGAATTGTAAGATGTGGACATCCCGATGTCCTTTCCCAAGTTGCACGAGGAATTGCAAACTTTGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAAAAGTGGCAGATCTTTTTTGATAGAAGATGGTGCACTTCCGTGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACATAGAGCTTGCACTCTGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACCTGGTTAGTGGAGGTGCTCTTTGGGAGCTTGTGCGGATTTCACGAGATTGTTCACGAGAGGATATACGGAATCTTGCTCGTCGTACTCTCAGTTCTGTCTCAACATTCAAATCTGAATTGCGGCGATTACGTGTAGATTATTAA 2655 0.4377 MASNRNGVQRGSAKFDRPLKPRPRPSSPSPGSALRRTTPAARNADAVPGRVRVAVRLRPRNAEEMMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEVDTSDRGIMVRSMEDIFADLSPNTDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRSGDVSMPGATLVEITDQHSFLELLRVGEANRIAANTKLNTESSRSHAILMVHIKRSVLESEDIVPSQNGDASHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKINLEAQCRITEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERHDCNSSVADNGEGPTSSSAGEVIEVKMLLETERSRRKAAEEEVEHLKNQLGKHTQTQAGDVEIIKLRNILEDEANQKKRLEEEIIILRSQLLQLNFEADQMRRCLENGSSGSTFSAMDSSRHSQFKDTANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDLVSGGALWELVRISRDCSREDIRNLARRTLSSVSTFKSELRRLRVDY* 885
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01649 884 CDD KISc 50 390 - -
Lapu1g01649 884 FunFam Kinesin-like protein 42 422 - -
Lapu1g01649 884 MobiDBLite consensus disorder prediction 1 47 - -
Lapu1g01649 884 SUPERFAMILY ARM repeat 617 876 IPR016024 -
Lapu1g01649 884 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 626 668 IPR000225 GO:0005515
Lapu1g01649 884 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01649 884 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01649 884 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01649 884 SMART kinesin_4 48 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01649 884 Pfam Armadillo/beta-catenin-like repeat 659 696 IPR000225 GO:0005515
Lapu1g01649 884 FunFam Kinesin-like protein 597 872 - -
Lapu1g01649 884 Gene3D - 717 881 IPR011989 -
Lapu1g01649 884 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 667 710 IPR000225 GO:0005515
Lapu1g01649 884 Coils Coil 408 439 - -
Lapu1g01649 884 Gene3D Kinesin motor domain 42 422 IPR036961 -
Lapu1g01649 884 Gene3D - 608 716 IPR011989 -
Lapu1g01649 884 PANTHER CENTROMERE PROTEIN E 50 607 IPR027640 GO:0003777|GO:0007018
Lapu1g01649 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 427 IPR027417 -
Lapu1g01649 884 Coils Coil 512 539 - -
Lapu1g01649 884 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu1g01649 884 Pfam Kinesin motor domain 56 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu1g01649 884 Coils Coil 452 472 - -
Lapu1g01649 884 SMART arm_5 656 697 IPR000225 GO:0005515
Lapu1g01649 884 SMART arm_5 698 739 IPR000225 GO:0005515
Lapu1g01649 884 SMART arm_5 830 872 IPR000225 GO:0005515
Lapu1g01649 884 SMART arm_5 740 780 IPR000225 GO:0005515
Lapu1g01649 884 SMART arm_5 616 655 IPR000225 GO:0005515
Lapu1g01649 884 Coils Coil 546 580 - -
Lapu1g01649 884 ProSiteProfiles Kinesin motor domain profile. 50 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu1g01649 Lapu-Chr1 29352454 29366843 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01649 49 439 Calmodulin-binding Proteins AT5G65930 34.314 1.28e-46 179
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01649 - K10396 pvu:PHAVU_008G075500g 1634.77