Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g01649 | ATGGCGTCGAACCGAAACGGCGTCCAAAGAGGAAGCGCCAAGTTCGATCGCCCTCTCAAGCCCCGGCCCCGTCCCTCCTCCCCTTCGCCGGGATCCGCCCTTCGCCGCACCACTCCTGCTGCCAGAAACGCGGACGCCGTGCCTGGAAGAGTACGGGTGGCTGTAAGATTGAGACCAAGAAATGCTGAAGAAATGATGGCAGATGCTGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGTAGAAACAATTGGGATTCAGACACGTATGAGTTTGATGAGGTGCTTACCGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACACTTGGACGACTAGGGGAAGTTGATACTTCTGATCGTGGTATCATGGTCCGTTCCATGGAGGATATTTTTGCTGACCTGTCACCCAATACTGATTCTGTCACAGTCTCATATCTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGCAAATGATAATATTCCTATAGTGGAAGATCCAAGAAGTGGTGATGTATCTATGCCTGGGGCAACTCTTGTAGAAATCACAGACCAACATAGTTTTTTGGAGTTGTTAAGAGTAGGGGAAGCTAATCGAATTGCTGCTAACACAAAACTGAATACTGAATCTTCTCGCAGTCATGCTATTCTGATGGTTCATATTAAGAGGTCTGTCTTGGAAAGTGAAGATATTGTACCTAGTCAAAATGGCGATGCCTCTCATTTGACTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCGGGTTCAGAACGTGTCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGGATGCTTCGAGATTCTTTTGGTGGCACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCACCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAATTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTACAATTAGATAAGCTTATTGCAGAGAATGAAAGACAGCAGAAAGCTTTTGAGGATGAAGTTGAGAAAATAAATTTGGAGGCACAATGTCGAATTACTGAGGTTGAGAGGAACTTTGCAGATGCATTGGAGAAAGAGAGACTGAAATGCCAGATGGAGTACATGGAATTGGTAAAAGAGCTGGAGCAGAAGTTGGTATTGAATCAAGAAAGACATGACTGCAATAGTTCTGTGGCTGATAATGGAGAGGGGCCCACATCGTCTTCAGCAGGTGAAGTTATCGAGGTCAAAATGCTGCTTGAAACTGAAAGAAGTCGGAGGAAGGCAGCTGAAGAAGAGGTAGAGCATCTAAAAAATCAGCTGGGGAAGCACACACAAACACAGGCTGGAGATGTGGAGATTATAAAGCTTCGTAACATCTTGGAGGATGAGGCTAATCAGAAAAAAAGACTCGAAGAAGAAATAATAATACTGAGAAGTCAATTATTGCAATTGAACTTTGAAGCTGACCAGATGAGAAGGTGTCTGGAAAATGGAAGCTCTGGGAGCACATTTTCTGCTATGGATTCCTCCCGGCATTCCCAATTCAAGGACACTGCAAACGGTCAGAAGTCATCTGTTGCTACACTCTTTGAACAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTAGCCAACCTAGCAGCCGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGGGGCCTTACTTCGTTGCTGATGCTTCTTCGAAGATACGAGGATGAAACTGTTCGCAGGGTAGCGGCAGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAATCAAGAACTTATTATGGCTGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGTGCAATTGCTAACTTATGTGGAAATGATAGAATATTGATGACACTGAGATCCCAGGGAGGTATAAAGGCTTTACTGGGAATTGTAAGATGTGGACATCCCGATGTCCTTTCCCAAGTTGCACGAGGAATTGCAAACTTTGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAAAAGTGGCAGATCTTTTTTGATAGAAGATGGTGCACTTCCGTGGATAGTACAAAATGCTAATAATGAAGCTGCACCAATCAGGCGTCACATAGAGCTTGCACTCTGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACCTGGTTAGTGGAGGTGCTCTTTGGGAGCTTGTGCGGATTTCACGAGATTGTTCACGAGAGGATATACGGAATCTTGCTCGTCGTACTCTCAGTTCTGTCTCAACATTCAAATCTGAATTGCGGCGATTACGTGTAGATTATTAA | 2655 | 0.4377 | MASNRNGVQRGSAKFDRPLKPRPRPSSPSPGSALRRTTPAARNADAVPGRVRVAVRLRPRNAEEMMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEVDTSDRGIMVRSMEDIFADLSPNTDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRSGDVSMPGATLVEITDQHSFLELLRVGEANRIAANTKLNTESSRSHAILMVHIKRSVLESEDIVPSQNGDASHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKINLEAQCRITEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERHDCNSSVADNGEGPTSSSAGEVIEVKMLLETERSRRKAAEEEVEHLKNQLGKHTQTQAGDVEIIKLRNILEDEANQKKRLEEEIIILRSQLLQLNFEADQMRRCLENGSSGSTFSAMDSSRHSQFKDTANGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDLVSGGALWELVRISRDCSREDIRNLARRTLSSVSTFKSELRRLRVDY* | 885 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g01649 | 884 | CDD | KISc | 50 | 390 | - | - | |
Lapu1g01649 | 884 | FunFam | Kinesin-like protein | 42 | 422 | - | - | |
Lapu1g01649 | 884 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Lapu1g01649 | 884 | SUPERFAMILY | ARM repeat | 617 | 876 | IPR016024 | - | |
Lapu1g01649 | 884 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 626 | 668 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | PRINTS | Kinesin heavy chain signature | 342 | 363 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lapu1g01649 | 884 | PRINTS | Kinesin heavy chain signature | 126 | 147 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lapu1g01649 | 884 | PRINTS | Kinesin heavy chain signature | 293 | 311 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lapu1g01649 | 884 | SMART | kinesin_4 | 48 | 400 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lapu1g01649 | 884 | Pfam | Armadillo/beta-catenin-like repeat | 659 | 696 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | FunFam | Kinesin-like protein | 597 | 872 | - | - | |
Lapu1g01649 | 884 | Gene3D | - | 717 | 881 | IPR011989 | - | |
Lapu1g01649 | 884 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 667 | 710 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | Coils | Coil | 408 | 439 | - | - | |
Lapu1g01649 | 884 | Gene3D | Kinesin motor domain | 42 | 422 | IPR036961 | - | |
Lapu1g01649 | 884 | Gene3D | - | 608 | 716 | IPR011989 | - | |
Lapu1g01649 | 884 | PANTHER | CENTROMERE PROTEIN E | 50 | 607 | IPR027640 | GO:0003777|GO:0007018 | |
Lapu1g01649 | 884 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 50 | 427 | IPR027417 | - | |
Lapu1g01649 | 884 | Coils | Coil | 512 | 539 | - | - | |
Lapu1g01649 | 884 | ProSitePatterns | Kinesin motor domain signature. | 292 | 303 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Lapu1g01649 | 884 | Pfam | Kinesin motor domain | 56 | 392 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Lapu1g01649 | 884 | Coils | Coil | 452 | 472 | - | - | |
Lapu1g01649 | 884 | SMART | arm_5 | 656 | 697 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | SMART | arm_5 | 698 | 739 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | SMART | arm_5 | 830 | 872 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | SMART | arm_5 | 740 | 780 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | SMART | arm_5 | 616 | 655 | IPR000225 | GO:0005515 | |
Lapu1g01649 | 884 | Coils | Coil | 546 | 580 | - | - | |
Lapu1g01649 | 884 | ProSiteProfiles | Kinesin motor domain profile. | 50 | 392 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g01649 | Lapu-Chr1 | 29352454 | 29366843 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g01649 | 49 | 439 | Calmodulin-binding Proteins | AT5G65930 | 34.314 | 1.28e-46 | 179 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g01649 | - | K10396 | pvu:PHAVU_008G075500g | 1634.77 |