Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01621 ATGCGAAACTCAAGCGAATCTTCTCCAGCTTCGCCTGCGCCGGTGGACCCCGTGCCGTTCCTTCCACAGAGCCGCCGCGTCACCCGCCGTGCACCGCTGCGCTCGGCGGCGAATTTCTTCCGGCGCGCGAGCGGGCGGCGCCTTATGTTGGGGGAGGCTTCGGTGCGGGTGCGGGAGGCAGCGGCGGCGGAGGTGGAGGGGCGGCAGAGCGAGTGGGCGTACTCGCGGCCGGTGGTAGCGGTGGACGTGCTGTGGAACGCGGCGTTTCTGGTGATCGGCGCGTCCGTGTTGTGGCTGGGCGCTGCGGAGGAGCCGAGCGTGCCACTGAGGACGTGGATTGTGGGTTATTTGGTGCAGGGTATAGTCCACTCTCTCTGTGTCCTAGTTGAGTTCAGACGGAGAATGATGAATGGGACCCACTTCCGTTCCAATGTGCCTAACCATGTTCAATGGAGCTTCACTTCTGAAAGTGATCAAGAGTTTTATGCTTCTGAATACTCTCTCGAGGGTGATGAAAACAGCATCATAAAATACATAGAGTCGGCAAATACCATGCTTTCGTTCATATGGTGGACTGTTGGGGTCTACTGGGTAACTCTTGGTGGCCAGAGTTTGACAACGGATGCACCTCAGCTTTACTGGGTCTGTATCGCATTTCTTTCTTTCGACGTTGTGATTGTACTGATCTGTGTTGCTGTTGCATGCCTTATTGGTATTGCTGTTTGCTGTTGTCTACCATGCATCCTTGCTCTCCTGTATGCAGTGACAGATCAGGAAGGGGCAACGAAGGAAGAGATTGACCAGTTGCCAAAATATAAGTTCAGAATAATAAAAGAAGGTGATATAGAAGAATCTTCTAGAGGAATAATGACCGAATATGAGAGTGAGACAGCCATCGAACATGTTGTTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTGTCTCCATATGATGATGGTGCTGAACTCAGAGAACTTCCTTGCAACCACCATTTTCATTGCACATGCATAGACAAATGGCTGCTAATCAATGCTACCTGCCCTCTGTGCAAACTTGACATTTTGAGTGGTGACCACCATCAAGAAGTTTGA 1092 0.5183 MRNSSESSPASPAPVDPVPFLPQSRRVTRRAPLRSAANFFRRASGRRLMLGEASVRVREAAAAEVEGRQSEWAYSRPVVAVDVLWNAAFLVIGASVLWLGAAEEPSVPLRTWIVGYLVQGIVHSLCVLVEFRRRMMNGTHFRSNVPNHVQWSFTSESDQEFYASEYSLEGDENSIIKYIESANTMLSFIWWTVGVYWVTLGGQSLTTDAPQLYWVCIAFLSFDVVIVLICVAVACLIGIAVCCCLPCILALLYAVTDQEGATKEEIDQLPKYKFRIIKEGDIEESSRGIMTEYESETAIEHVVALEDAECCICLSPYDDGAELRELPCNHHFHCTCIDKWLLINATCPLCKLDILSGDHHQEV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01621 363 MobiDBLite consensus disorder prediction 1 21 - -
Lapu1g01621 363 PANTHER TARGET OF ERK KINASE MPK-1 49 356 - -
Lapu1g01621 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 356 IPR013083 -
Lapu1g01621 363 Pfam Ring finger domain 309 351 IPR001841 -
Lapu1g01621 363 SUPERFAMILY RING/U-box 297 356 - -
Lapu1g01621 363 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Lapu1g01621 363 SMART ring_2 310 350 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01621 Lapu-Chr1 29040021 29045581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01621 7 361 C3H Transcription Factor Family AT1G68070 46.111 1.80e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01621 - - gmx:100795425 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01621 1 29040021 29045581 Lapu1g01621 1 29040021 29045581 ECH