Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01603 ATGTTTTGGTACTTCAGTTTTGTTGGTCGAGTCATGCTTTCAGTAAACAAGCTTTGTGTGGTTCGATTTTCTTGTGTTCCATTTGTGGCAGCCAATAATCAATTCTGCACCTACCAAACCAAAACCATGGTGGAAGATGGTGATGAGGTTGCAGTTGATGCACGTTCCACAGAAGACTGGTTGTTGCATGCGCAGGAACTTGTTCCCGTTGTCCTTGATAAGGCAAGAGAGGTTAAAGGATTTGCTGGTAGATGGAAGATGATCATTGCAAAACTGGAACAGATCCCGTCGCGATTATCAGATTTATCAAGCCATCCATGCTTCTCAAAAAATGCTCTATGCAAAGAGCAGTTGCAGGCTGTGTCAAAGACACTTGGGGAAGCGATTGAGTTAGCTGAGTTGTGTATGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGGCTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCATTGGCTGTGTGTAGTTCTGTGGCAGAATCAGATATTGCAACACTCAACATAAGGGAATTGTTAGCGCGCCTTCAGATTGGGCACTTGGAAGCGAAGCACCAAGCCCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAACGTTTTAGCTGCTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGGATCAGAGAGAAAACAGTTACTGTTATATGCTCGCTTGCAGAATCTGGTAGTTGCGAAAACTGGCTAGTTTCTGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGCAGTGCGGTGGGGAAGGAGAAGGCCACAATATCCCTTCAGAGGTTGTCTATGTCAGCAGAAACAGCCCGAGCAATCGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTATCACAGGCTGCAGCTGCTTGTACTCTGAAGAATATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCTGAAGAAGGGATTGTGAGGATCATGATCAATCTGCTTAACTGTGGAATTCTGTTAGGTTCCAAAGAGCATGCTGCAGAATGTTTGCAGAACCTCACTGCAAGCAATGAGAATCTAAGGAGGAGTGTCATATCAGAAGGTGGTGTTAGGAGTCTTCTGGCCTATCTTGATGGTCCACTTCCTCAAGAATCTGCTGTTGGAGCATTGAGGAATTTGGTCGGATCCGTCCCAGAAGAATCCTTGGTCTCTCTCGGTTTGGTCCCCCGGTTAGTTCACGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCCGCAGTGGCCGCAATATGCCGAGTTTGCAGCTCCACAGACATGAAGAAAATGGTTGGTGAAGCTGGATGCATCCCTCTCCTTGTGAAGATGCTTGAGGCCAAGTCAAACAATGCTAGAGAGGTGGCTGCTCAAGCAATTGCAAGCTTGGTGGTTTTGTCTCAGAATAGGAGAGAAGTTAAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCTCAGAACACTGCAAAAAAATATGCAGTCACTTGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAGCTCATGATCTCGTATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTGCAGGAGCTAAAAAGCTACATGAACGGTTGGAAAGAGGGAAATTAAGAAGTTTGTTTAGCAAGAAATAG 1803 0.4565 MFWYFSFVGRVMLSVNKLCVVRFSCVPFVAANNQFCTYQTKTMVEDGDEVAVDARSTEDWLLHAQELVPVVLDKAREVKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDLDALAGKLDLNLRDCGLLIKTGVLGEATLPLAVCSSVAESDIATLNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKNVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARAIVGHGGVPPLVELCQIGDSVSQAAAACTLKNISAVPEVRQTLSEEGIVRIMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLVPRLVHVLKSGSLGAQQAAVAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNNAREVAAQAIASLVVLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIAGAKKLHERLERGKLRSLFSKK* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01603 600 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 54 598 - -
Lapu1g01603 600 SMART arm_5 307 347 IPR000225 GO:0005515
Lapu1g01603 600 SMART arm_5 511 553 IPR000225 GO:0005515
Lapu1g01603 600 SMART arm_5 348 389 IPR000225 GO:0005515
Lapu1g01603 600 SMART arm_5 430 469 IPR000225 GO:0005515
Lapu1g01603 600 SMART arm_5 225 265 IPR000225 GO:0005515
Lapu1g01603 600 SMART arm_5 470 510 IPR000225 GO:0005515
Lapu1g01603 600 SMART arm_5 390 429 IPR000225 GO:0005515
Lapu1g01603 600 Pfam Armadillo/beta-catenin-like repeat 471 508 IPR000225 GO:0005515
Lapu1g01603 600 Pfam Armadillo/beta-catenin-like repeat 311 347 IPR000225 GO:0005515
Lapu1g01603 600 SUPERFAMILY ARM repeat 196 575 IPR016024 -
Lapu1g01603 600 Gene3D - 374 583 IPR011989 -
Lapu1g01603 600 Gene3D - 187 373 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01603 Lapu-Chr1 28809908 28813677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01603 440 583 U-box Gene Family AT3G54790 29.861 2.76e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01603 - - gmx:100781453 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01603 1 28809908 28813677 Lapu1g01603 1 28809908 28813677 ECH
Lapu1g01603 1 28809908 28813677 Lapu10g00059 10 2037132 2040786 PCT