Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01594 ATGGGAGTAGGTGCTAATTTCTGGGAGCTGCTAAAGCCCTATGCGAGACCTGAGGGCTTTGATTTCTTGAGGAACAAGCGAGTTGCTGTGGACCTTTCATTCTGGATTGTTCAGCATGAGAATGCCATGAAGGCCACTCATGTCAGAAAACCTCACCTCAGACTCACCTTCTTCCGCACCATCAATCTTTTCTCCAAGTTTGGGGCTCTTCCTGTGTTCATTGTTGATGGGACTCCATCTCCATTGAAATCCCAGGCCAGGATTGCGAGATATTTTCGGTCATCTGGCATTGAGTTGACAAGCTTGCCAGTGCCTGAAGGTGTTTCAGCTGAGAGGAGTTGTCTGTTTTCAAGTCGTGTTCAAGAATGTGTGGAACTGGTTAAACTACTTGGAATGCCTGTACTAAAGGCTAAAGGAGAGGCCGAATCACTCTGTGCTCAATTAAATAGTGAAGGTCATGTAGATGCTTGCATTACAGCAGACAGTGATGCATTCCTCTTTGGGGCCAAATGTATTATAAAATGTTTCTGTCCCAATTCCAAAGAACCGTTTGAATGCTACAACATGTCAGATATTGAAGCTGGACTTGGATTGAAGAGGAAACACTTAATAGCTATCTCTCTTTTGGTTGGAAATGATCATGATATGAATGGTGTTCGAGGAATTGGGCTTGATAATGCACTTCATTTTGTTAAAGCTTTTAATGAAGAAGATATATTGAATAGATTACAGGAGATAGGCAAAGGAGGGAATACTTCACAAATTCCCAGCTGCACTAAATTTGAGGACAGCATAGATGCTGATGGAAACTCCCCGAATAGAAAACAATCTCATTGCTCATTCTGTGGGCATCCTGGCAGCAAGAAAGATCATGTAAAATTTTCTTGTGAATACTGTGTCACAAAGGATGATGAAGGCTGCCAGAGAAAACCAGAGGGTTTTAAATGTGATTGCTTCTCATGTGTTTCGAATAGGAGACATAAGGAGCAAAAAAGAGAGGAAAATTGGTACTCAAAAATTTGTCACAAAATTGCAGAGGAGCCAGACTTTCCCAAAGTTGAAATCATTGACATGTATTTATGCAATGACAATGGTTACTTTTCAGCAAGTGATGGTCCTCAGATCATATGGCGAAAACCCAATATTGAGATGCTGATTGATTTTTTAAACTTCCATCAGCATTGGGAACCATCCTACATTCGACGGACGATATTTCCTATGATGTCTACTATCTTTCTGAGAGATATGTCTACACCAATGAGAGAAACTTTGTTATTTGGGCAATATGAGTTTGATTCGGTAGAACGTGTGAAGATGAGATATGGATATCAGTTTTACGTGGTCAAGTGGAAACGTGCTGGTGGAAACATTGCCACCAGCAAAGTTCTATCAAATGAATCCAGTGTGCAACAAGATGTTGTAGTAGAGCTTGATGAACTGGTGGATCTACTAGACGACTGCGACGTTCCTGAGATTCGTGTAGATGATGGATGTAGTTTTCTTTTTACAGATGAAAATATGGACCTAGTAGCGACTGCTTTTCCAGCAGAAGTCAAAAGTTTTTTGCAGGAGCAGGAACGGAAACAAAGAAAGAATTCAACATCAAGGTGCCAAGAAAATGAAAAATTAGCTTCTCCAAACCCAAGAAGTACTCAGCTAAACATTACAGAGTTCTTTCCGTCTACCAAAATTAAACATCGTCAATCAAAACAAAGGGAAGAATCATCCAATAATGCTGATAGTGAGGGCAGCAGGGGTTCTAAAATGAAAAGAAAAATGTCAAGTTCTGACAAGCTTCCAAAATCTGTGAGGCGTCGCCTTTTGTTTGACGAGTGA 1836 0.4069 MGVGANFWELLKPYARPEGFDFLRNKRVAVDLSFWIVQHENAMKATHVRKPHLRLTFFRTINLFSKFGALPVFIVDGTPSPLKSQARIARYFRSSGIELTSLPVPEGVSAERSCLFSSRVQECVELVKLLGMPVLKAKGEAESLCAQLNSEGHVDACITADSDAFLFGAKCIIKCFCPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDMNGVRGIGLDNALHFVKAFNEEDILNRLQEIGKGGNTSQIPSCTKFEDSIDADGNSPNRKQSHCSFCGHPGSKKDHVKFSCEYCVTKDDEGCQRKPEGFKCDCFSCVSNRRHKEQKREENWYSKICHKIAEEPDFPKVEIIDMYLCNDNGYFSASDGPQIIWRKPNIEMLIDFLNFHQHWEPSYIRRTIFPMMSTIFLRDMSTPMRETLLFGQYEFDSVERVKMRYGYQFYVVKWKRAGGNIATSKVLSNESSVQQDVVVELDELVDLLDDCDVPEIRVDDGCSFLFTDENMDLVATAFPAEVKSFLQEQERKQRKNSTSRCQENEKLASPNPRSTQLNITEFFPSTKIKHRQSKQREESSNNADSEGSRGSKMKRKMSSSDKLPKSVRRRLLFDE* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01594 611 SMART xpgineu 128 198 IPR006086 GO:0004518
Lapu1g01594 611 Gene3D - 5 197 - -
Lapu1g01594 611 SMART xpgn3 1 97 IPR006085 GO:0004518
Lapu1g01594 611 MobiDBLite consensus disorder prediction 525 611 - -
Lapu1g01594 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Lapu1g01594 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Lapu1g01594 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Lapu1g01594 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Lapu1g01594 611 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Lapu1g01594 611 MobiDBLite consensus disorder prediction 563 611 - -
Lapu1g01594 611 FunFam Flap endonuclease GEN-like 1 198 256 - -
Lapu1g01594 611 CDD PIN_GEN1 2 202 - -
Lapu1g01594 611 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 573 IPR006084 -
Lapu1g01594 611 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Lapu1g01594 611 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 415 IPR036279 -
Lapu1g01594 611 Gene3D - 198 259 - -
Lapu1g01594 611 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Lapu1g01594 611 FunFam Flap endonuclease GEN-like 1 2 197 - -
Lapu1g01594 611 MobiDBLite consensus disorder prediction 538 562 - -
Lapu1g01594 611 Pfam XPG N-terminal domain 1 93 IPR006085 GO:0004518
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01594 16 314 Core DNA Replication Machinery Family AT5G26680 25.228 8.33e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01594 K15338 - gmx:100791251 990.719