Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01591 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCTGTGGCTACAGGCAAATGGGGTGGAACTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTCTGAAAAAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGAGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGATGATAGGCTACTAATGATGCTGTTATTGACTGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAACTAAGAGGAACAACATTATATCGTGCGACTGAATTGCAGAAGAAAAGCTTGCTTTCTTTGTATGAAACTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGACCCGTGCTTTGAACATTCCAATGCCTCGATCTTATGTTTTTCCAGAAATGCAAGATGATCATGACAGTTGCATTCCCGAAGCTGATGAAAAAAGAAGCCAGGTTAAAAAATCTAACAATTTGACCAAGGAAGGGACATGCAACGGTAACCCAATGGCAGGAGAAACTGTTTGGGTGGAGGGTCTTGTTCCTGGCATCGACTTTTGTAACCATGACCTGAAGCCGATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTTCCTTTCTCCATGTATCTTATTTTGGCTACTCAAAGTCCCTTGCAGAAAGACCAAGAGATTTCCATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTGTACCTGTATGGTTTTGTTATTGATGGGAACACAGATGACTATGTCATGGTCCACTATCCAGCAGAAGCAATGAATACTATTTCCTTTTCAGAGTCCAAAGGCCAGCTTCTTGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACCCAAAACGTTTCTGGATAATGGGTTTTTTCCACTAGGGACCCCAACCATTGGAGAAGATAACAAGGGGAAAGCTGACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGAGGCCATCTTATGCAAACAAGCTGGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAGCTTTACAAGGTTTCATCGATGCTGGAAGAGCTTGCTGGACCGAAAAAGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTGTGTGGTGATTCTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGCTGGATCTTGAAGAGAGTTCTGGAACAGATGAAAATGACCTTGATTTACTCAACAAAGCCCTTATTATTGACAACCAGGAAGATAGCAAACAATGCACCAGCAATTTAAGCACAAATACAAATGACTCTGAGGAGCCAAAGTTGATGACTAGAAACAAGTGGTCTGCAATAGTATATCGGCGTGGACAGAAGCAGCTAACAAGGTTATTCCTGAAAGAAGCAGAACATGCTTTGCAGTTATCACTGAATGAAGAAGAGGTGATTTCTTCTTGTTAA 1686 0.417 MASPEEAKLETFMLWLQANGVELRGCKIKWCDSKRGFGIFSEKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDIVKKLLTLDGNSEIEVCFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHDSCIPEADEKRSQVKKSNNLTKEGTCNGNPMAGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLILATQSPLQKDQEISISYGNKGNEELLYLYGFVIDGNTDDYVMVHYPAEAMNTISFSESKGQLLEVQNAEMRCLLPKTFLDNGFFPLGTPTIGEDNKGKADQVCNYSWSGQRKRPSYANKLVFPEKFMTTLRTIAMQEDELYKVSSMLEELAGPKKERELSDTDVQSAVWEVCGDSGALQLLVDLLRVKMLDLEESSGTDENDLDLLNKALIIDNQEDSKQCTSNLSTNTNDSEEPKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSLNEEEVISSC* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01591 561 Pfam SET domain 36 299 IPR001214 GO:0005515
Lapu1g01591 561 ProSiteProfiles SET domain profile. 19 299 IPR001214 GO:0005515
Lapu1g01591 561 CDD SET_LSMT 32 313 - -
Lapu1g01591 561 SUPERFAMILY SET domain 8 317 IPR046341 -
Lapu1g01591 561 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 495 - -
Lapu1g01591 561 Gene3D set domain protein methyltransferase, domain 1 5 313 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01591 8 190 NAC Transcription Factor Family AT3G56570 26.344 2.79e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu1g01591 SET 4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01591 - - vun:114183365 1020.76