Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01574 ATGGATATTGCTTGTAGTTTGCCGCAGTCGAGAATGTTGCACGGAGGTGTGGGGACGGGTTACAGACACGGATCAGTTGGTCAGTTTGGTTGTTTTGATTTTAGAGGGAGAGGTTTCGGTTGTGCTGTTTTTGACAACTCGAGAAGTGTTTCAAAATTTCGTGTTAGTAGGATGAGTGTTTCTGCTTGTGGGAGTAATTCCAGAGTGGTTACTGGTAGGGAGTTTAAAGTTTTGAATATTAAGAGAAGTTTGTCTTGTAAGAATAATAATCTTCTTATGGGGTCTAGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCCTTAGCTTATGTTACGGGCAATGGTCGGAGTGTTGATTATGTGGAAGGTTCAGGTGAGGATGCAGGATTGGGGCCTGTTTCTAGTGCTGAACTGGATGCACCTTTGGAAGAAGAAGGGCAAGCCGAAAGAAAAGAGGGAGGGAGTGAAATAGGATCAGAGGAACAAAGTATGGATGAATTGAAAGAACTATTGCAGAAGGCCAAGAAGGAGCTAGAAGTAGCTCAACTAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCAATTTTTTTGCATGATGAAGCTGTGATTTCTTGGAATGATGTTAATTCCACCCTTGACACCATCCAAGAAATAGCTAATGAAGAACTTATGGCCAAAGAAGCTGTCCAAAACGCAACAATGTCTCTTTCATTAGCCGAGGCAAGGCTTCAAGTAGCCTTAGAATCTTTGGAGCCCGCTAAAGAAGTACCTGATTCCGCACAAGATTCTAGTGAGAGCAATGGTGATAAGGACATGGAGGAAGAGGAGAAAGCTATTTTGTTTGCTAAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCAGAGCTGAGGCGCTTGCAAAATAGGAAGGAAGAGTTACAGAAGGAAGTGAGCAAATATCAAGACATTGCTGAAACGGCTCAGCTGAATGCTGTGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTGGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCAACAAAACGTGTAAATGATGCAGAGATTGCCTTACAGCGAGCAGAGATTGCCTTGCAGCGAGCAGAGAAGTCTAATTCTAATTCTAATTCAAACACTGATACCATAGAAACTACACAAGCACAGGATGTTGTCGCTATTCCTGAGGAGGAGAAAGTGGTTAACTATTTTTCTGGTGATGTCACTGTTGAAAGAGACAAAGATCTGGCAATTGATGATGAATCTTTGGTTGCAAAGTTATCTCCTGAAACACTATCTGATAAATCCAACCAAATTTTGGAAGACAAAACACAATCTGATTATTTTAGTGATAATGAGAATGTTGTGCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACCAGAGATAGTTCACTCTTCGCTCCCAAGGCATTACTGAAAAAGTCTTCTCGATTCTTTTCTGCATCGTTCTTTTCTTTTACTGAAGATGGGACTGAGTTCACACCAGCATCAGTCTTCCAGGGCCTTATATTATCTGTACAGAAGCAGTTGCCCAAGCTGATATTTGGGTTATTGTTAATGGGAGCAGGGGTTACCTTCTTTGCTAATAAAGTGGATAGGAATGCTCAGCTGCTTCCGCAGGCAGATGTTATCATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCACTGGTTAGACACCTTCAGAAACTGCCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGCTATTGCTTGCAAGTGTTATATTTGTGCCTATATTTCAGAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTATTTGGCTGCTGGTATCTTGATTGGGCCATATGGTCTTTCTATCATTCGTCACGTTCATGGCACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTGTAGCTATTGGTTTGGTGGTTCATTTTATTTGTGGCCAACCTGGTCCTGCTGCTATTGTTGTTGGGAATGGCCTTGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGGCGAGCTACTTTTTCTGTGTTACTCTTTCAGGATCTGGCTGTTGTGGTGTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGAATGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGGGGACGTTTGCTCCTTCGACCAATATACAAGCAGGTTGCTGAAAATCAAAATGCTGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACGAGTCTTCTTACGGCCAGGGCAGGACTTTCCATGGCATTGGGAGCCTTTTTGGCTGGTTTACTGCTGGCAGAAACTGAATTTTCATTACAGGTTGAATCTGACATTGCTCCATATCGTGGCCTTCTTTTGGGGCTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTATCAAACTTTCCAGTCATTGGAGTCACACTAGGACTCTTGATATGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATGTTTGGGATTTCCCTCATTTCTGCCATCAGAGCTGGTCTTCTTCTTGCTCCTGGAGGAGAGTTTGCATTTGTGGCTTTTGGTGATGCTGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCTGCAGGAGGTCAGCTGATTGCTTCCCGTTTTGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTGGGCCAGATCATTGCCCAACTTCTTTCTGAGCGTCTTATTCCGTTTGTCGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGCCGTGCTCTGGGTCTTCCTGTGTACTTTGGGGATGCTGGTAGTAGAGAGGTCTTACATAAGGTTGGGGCTGAAAGGGCATGTGCGGCAGCAATAACACTTGATACACCTGGTGCAAATTATAGAACAGTCTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACCTTTGTCCGTGCCCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTAGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTTCTCAGGCCAAACTCCCCACTACGGAGATTGCAGCAACTATAAATGAATTCAGATCTCGACATCTAGCTGAGCTGACAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTAATAAAATTATGAGCAAGCCAAAATCTCAATCCACAGATTCATTAGATGAGACCCCAGTTTCTGAAGGCACACTGGCAATATGA 3630 0.43 MDIACSLPQSRMLHGGVGTGYRHGSVGQFGCFDFRGRGFGCAVFDNSRSVSKFRVSRMSVSACGSNSRVVTGREFKVLNIKRSLSCKNNNLLMGSRVIWSKCQGNDSLAYVTGNGRSVDYVEGSGEDAGLGPVSSAELDAPLEEEGQAERKEGGSEIGSEEQSMDELKELLQKAKKELEVAQLNSTMFEEKVKKISETAIFLHDEAVISWNDVNSTLDTIQEIANEELMAKEAVQNATMSLSLAEARLQVALESLEPAKEVPDSAQDSSESNGDKDMEEEEKAILFAKEDIKECQANLANCEAELRRLQNRKEELQKEVSKYQDIAETAQLNAVKAEEDVTNIMLLAEQAVAFELEATKRVNDAEIALQRAEIALQRAEKSNSNSNSNTDTIETTQAQDVVAIPEEEKVVNYFSGDVTVERDKDLAIDDESLVAKLSPETLSDKSNQILEDKTQSDYFSDNENVVQTKKQETQKDLTRDSSLFAPKALLKKSSRFFSASFFSFTEDGTEFTPASVFQGLILSVQKQLPKLIFGLLLMGAGVTFFANKVDRNAQLLPQADVIMTSVEEVSSSAKPLVRHLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAIGLVVHFICGQPGPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVIGVTLGLLICGKTILVSLMGRMFGISLISAIRAGLLLAPGGEFAFVAFGDAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALGLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTTEIAATINEFRSRHLAELTELCEASGSSLGYGFNKIMSKPKSQSTDSLDETPVSEGTLAI* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01574 1209 MobiDBLite consensus disorder prediction 377 397 - -
Lapu1g01574 1209 Pfam TrkA-N domain 1014 1127 IPR003148 GO:0006813
Lapu1g01574 1209 FunFam K(+) efflux antiporter 2 chloroplastic 1009 1173 - -
Lapu1g01574 1209 Coils Coil 157 191 - -
Lapu1g01574 1209 MobiDBLite consensus disorder prediction 1188 1209 - -
Lapu1g01574 1209 Coils Coil 361 388 - -
Lapu1g01574 1209 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 612 892 IPR004771 GO:0006812|GO:0008324|GO:0016020
Lapu1g01574 1209 MobiDBLite consensus disorder prediction 139 164 - -
Lapu1g01574 1209 ProSiteProfiles RCK N-terminal domain profile. 1013 1135 IPR003148 GO:0006813
Lapu1g01574 1209 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 199 1198 - -
Lapu1g01574 1209 MobiDBLite consensus disorder prediction 255 278 - -
Lapu1g01574 1209 Pfam Sodium/hydrogen exchanger family 611 981 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu1g01574 1209 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1010 1151 IPR036291 -
Lapu1g01574 1209 Gene3D - 601 989 IPR038770 -
Lapu1g01574 1209 FunFam K(+) efflux antiporter 2 chloroplastic 601 987 - -
Lapu1g01574 1209 Coils Coil 277 339 - -
Lapu1g01574 1209 Gene3D - 1009 1173 - -
Lapu1g01574 1209 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01574 Lapu-Chr1 28544239 28561697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01574 1 1209 Inorganic Solute Cotransporters AT4G00630 65.590 0.0 1417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01574 K03455 - gmx:100818163 1936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01574 1 28544239 28561697 Lapu1g01574 1 28544239 28561697 ECH
Lapu1g01574 1 28544239 28561697 Lapu10g00091 10 2501805 2520569 PCT