Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g01563 | ATGGATCGTGGGGACCAAATGGCGTTATCCGGGTCTTACTATATGCAGCAAAGAGGAATACCTGGATCTGGAGCACAGGCTGAGTTACATATGTCACCTAATATTCGACCACTCTCTAATCCGAATCTACCATTTCAATCCAGCATTGGTGGTGGTTCCATTGGATCCACATTGCCATTAGAGTCTTCAGCAATTTCGGCTCATGGTGTGAATATGGGAGCACCTCCTGGGGCACCTCCAGGGGAACCTGTTAAAAGGAAGAGGGGAAGGCCTAGGAAATATGGAACTGATGGAACTGTGTCATTGGCATTGACTCCAACATCATCTAGTCATCCTGGGGCCTTGACACAGGGCCAGAAACGGGGCAGAGGGCGCCCACCAGGAACTGGGAAAAAACAGCAGTTGGCTTCTCTTGGTGAGTTGATGTCTGGTTCAGCTGGGATGGGATTCACTCCTCATATCATCAACATTGCAAGTGGAGAAGACATTGCAACAAAAATCATGGCATTTTCTCAGCAGGGACCTAGAGCTGTATGTATTTTGTCAGCCAATGGCGCTGTCTCAACTGTCACACTTCGGCAGCCATCAACTTCAGGAGGCACTGTCACATACGAGGTTTGGCACTTTCTCAGTGTTATGTATTTGTTGAAGATACACATAGAGCATGGGCGTTTCGAGATAGTGTGCCTATCAGGCTCTTACTTGGTCACTGATACTAGTGGTTCACGCAATCGAACTGGTGGACTGAGTGTGTCCCTTGCTAGTCCTGACGGCCGTGTCATTGGTGGAGGAGTTGGTGGAGTTCTTATTGCATCAAGTCCTGTTCAGGTGGTAGTTGGGAGTTTTCAATGGGGTGGATCAAAGACAAAGAACAAGAAGAAGGAAAGCTCGGAAGGTGCAGCAGAAGTTGGTGTGGAGTCAGAGCATCAGGGAGTTCATAATCCAGTGGCACTGAACAGCATCTCACCAAATCAAAACCTTTCTCCAACACCTTCATCTTTAAGTCCTTGGTCGCAATCACGACCGTTGGATATGCGTAATTCCCATGTGGACATTGACTTGATGCGTGGGTGA | 1074 | 0.4814 | MDRGDQMALSGSYYMQQRGIPGSGAQAELHMSPNIRPLSNPNLPFQSSIGGGSIGSTLPLESSAISAHGVNMGAPPGAPPGEPVKRKRGRPRKYGTDGTVSLALTPTSSSHPGALTQGQKRGRGRPPGTGKKQQLASLGELMSGSAGMGFTPHIINIASGEDIATKIMAFSQQGPRAVCILSANGAVSTVTLRQPSTSGGTVTYEVWHFLSVMYLLKIHIEHGRFEIVCLSGSYLVTDTSGSRNRTGGLSVSLASPDGRVIGGGVGGVLIASSPVQVVVGSFQWGGSKTKNKKKESSEGAAEVGVESEHQGVHNPVALNSISPNQNLSPTPSSLSPWSQSRPLDMRNSHVDIDLMRG* | 358 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g01563 | 357 | CDD | DUF296 | 151 | 282 | IPR005175 | - | |
Lapu1g01563 | 357 | MobiDBLite | consensus disorder prediction | 67 | 135 | - | - | |
Lapu1g01563 | 357 | MobiDBLite | consensus disorder prediction | 288 | 302 | - | - | |
Lapu1g01563 | 357 | MobiDBLite | consensus disorder prediction | 313 | 345 | - | - | |
Lapu1g01563 | 357 | MobiDBLite | consensus disorder prediction | 100 | 116 | - | - | |
Lapu1g01563 | 357 | ProSiteProfiles | PPC domain profile profile. | 146 | 306 | IPR005175 | - | |
Lapu1g01563 | 357 | Gene3D | - | 152 | 309 | - | - | |
Lapu1g01563 | 357 | MobiDBLite | consensus disorder prediction | 286 | 357 | - | - | |
Lapu1g01563 | 357 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 150 | 284 | - | - | |
Lapu1g01563 | 357 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 152 | 283 | IPR005175 | - | |
Lapu1g01563 | 357 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 66 | 331 | IPR039605 | GO:0003680 | |
Lapu1g01563 | 357 | SMART | AT_hook_2 | 120 | 132 | IPR017956 | GO:0003677 | |
Lapu1g01563 | 357 | SMART | AT_hook_2 | 85 | 97 | IPR017956 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g01563 | Lapu-Chr1 | 28455841 | 28463131 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g01563 | 1 | 357 | AT-hook Motif Nuclear Localized (AHL) Family | AT3G61310 | 46.154 | 1.67e-79 | 245 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g01563 | - | - | gmx:100814615 | 539.65 |