Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01547 ATGGCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGCTTTATCAGTATATTTGATTTTCGTCATGCTCGCTTTACTCGAAAGTTGATAGCAGATAAGAGACATGGAAGCAAGCATGCTTTTGGTGCTGCACTTACTAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATGAAAACTATGAAGGCAATTTTGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATTATTGACCAGGATGAAGTAAAGGATCAAGCTAACAGGGAAGGAGAATCAAAGCAATCCAGATCAGGGCGTGACGACCCCCCAAAGACAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAGCCGTGATTTGAGTTCAGATGCAACATTGAAATCAGAATTTTCACATAAGCAGCATTCAAGGGAACAGTCAAAAGATACTGTAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGCATGACAATGATGTCAAAATGGATGCTCAGTCAAACCAAAAGAATGTTATGTCTGAAAACCTTGCTATTGCAATCCATGAACTTGTGAATCAGATGAGATTGAATGGGAATGATCTGCCTGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTCCTTAGACTTCTACAAGACCCAAATTCGCACTTGCTGAAATACATTCAGGAGTTGGAAAATGCTCAAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGGCTCCAACTGCTCTGAACTAGAACTTGTTAATCTGAAACAAACTAGGGAGAGTGCCAACCGCAAGCATCGTAACTTTTTCAGGAAAAGGGGGAAGTCTCAATCAAAAGATCCAACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACAGGCATGCAAATTTCTGAAAGTGAAAACAACCTTGCCTCATCGCTAGATTCTGCCCATTACAAAGGTCCATCTGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAGATAAAAAGGAAACTGAAACATGCCATGGGAAAGGAGAGGCATGGAAACCCTGAAGTAATCCCACGAAAACTCCCCGTTGAACGTCAAAATAAGTTGCCAAGAGGCAAATGCAAAGATAATGCTGGAATGAAATCTCCTAATAAAGATCATTTCTTCATTGAAAAGATTGCGAGACCTATGTTTGATGTTGTGAAAGGAAACAAGACTGATACATTGAAAGACTCTGAATTGAATCTAGAACAAGAAAGTGGTATTCCCAAGCTAAGTGCTTCTAACATATACGTTGAGGCAAGGAAACATCTGTGTGAGATGCTAGATAATGCTGATGAAAACACAAACATTTCAAGCAGGAAGATTCCCAAAACCCTTGGGAGAATACTTTCTCTTCCCGAGTACAACTTTTCACCTGTGGAAAGTCCTGGAAGGGATTTGGAGCATCATTCTGTGACAGCACAGGCAAGATTTTCATCCACAGGCAAAACTAGGGAAGTTAATAATGAGGATAATTCGTCCCCACAACCAGCAACCTCTATTGGTATTCCAGATCAGGAAACTAACAATTCAGAAAAGCAGTCAAGCATTTCTGATGAAATCTCTAATAATAAAGTACAAGAAATTAAGCCAGTTTCAAATTTCTCCCATAATGTTGGTCCTGTTGATACATCTGAAGTCTGTCGTCCTATTAGAGATGAGATAGTCACTGAAGGTAATGTTGAATCTGCAGAAGAGAAAAATGAATTGGAATCAGAGCCAAATGGCTTCGTCATAGGAAAGGACCAAAATTTTGATATCTCAGAAATTCCTGATGGTGCAAGATGTTCTGGATGTTTGAATCAGGATGAGTATATAACTGAAGAGAACCAACTATCATCTCTACCGTCATCTCCTCACTCTTCGATCACTAAGAAAAGTGAAGAGCTAGAATGTGGGCCAGAGTTATCTGGGCGACCGAGCCCTGTGTCTGTTCTTGATACATCATTTTCAGATGATGACTCTGGACACTCCAGATGTCAACCTGTTAAATTACCAGTACAACCTCTACAACTTCAATTTGAAGAACAGGACTCTTCACCTGCAGAACAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATACATGACTACATCAAAGTTGTCTTGCATGCCTCTGGTTTGACAAGAGAGCAGTTGTTGGTGAAATGCTTTACCTCTGACAAAATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTCTCGAACCTGCTTTGCCATGACCAGAAGCTCCTATTTGACTCTATCAATGAAGTTCTCACGGAGGTTTGTCAGCATTACTTTGGGGTCTCACCTTGTGTTTCATTAGTAAATCCTAGCATGAGGCCAGCTCCAACTATGAGAAGGGTTACTTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTGCTTCCCTTGCCCCCACCACGCACTTTAGAGCAGATTGTTAGGAAAGACATGGCAAGAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAACAATTGGTTTTGAAATGGAAGAGGCCATTCTTACTGAACTGATGGAAGACACAATTTTGAGCCTTGTGAGTGAAAGTTCAGTGCTTCAATTTGAGTTGAAGGACAATTAG 2772 0.4019 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAFGAALTKNKFEVLSNLDENYEGNFDRGESKRLTLTTDAEKLSVKKLIEEEMIIDQDEVKDQANREGESKQSRSGRDDPPKTDSKRKKKSRKKSRDLSSDATLKSEFSHKQHSREQSKDTVDLDKIMDDFCHVEAACSMMHDNDVKMDAQSNQKNVMSENLAIAIHELVNQMRLNGNDLPEDGQFLSSRELMEALQVISSDKQLFLRLLQDPNSHLLKYIQELENAQGRDGKECSSLTGSNCSELELVNLKQTRESANRKHRNFFRKRGKSQSKDPTNENGKTEFSNRIVILKPALTGMQISESENNLASSLDSAHYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQNKLPRGKCKDNAGMKSPNKDHFFIEKIARPMFDVVKGNKTDTLKDSELNLEQESGIPKLSASNIYVEARKHLCEMLDNADENTNISSRKIPKTLGRILSLPEYNFSPVESPGRDLEHHSVTAQARFSSTGKTREVNNEDNSSPQPATSIGIPDQETNNSEKQSSISDEISNNKVQEIKPVSNFSHNVGPVDTSEVCRPIRDEIVTEGNVESAEEKNELESEPNGFVIGKDQNFDISEIPDGARCSGCLNQDEYITEENQLSSLPSSPHSSITKKSEELECGPELSGRPSPVSVLDTSFSDDDSGHSRCQPVKLPVQPLQLQFEEQDSSPAEQFDTGKYSFGENELIHDYIKVVLHASGLTREQLLVKCFTSDKILDPSLFDQVEFFSNLLCHDQKLLFDSINEVLTEVCQHYFGVSPCVSLVNPSMRPAPTMRRVTFKVWEGVCWHVLPLPPPRTLEQIVRKDMARRGTWMDLELDAETIGFEMEEAILTELMEDTILSLVSESSVLQFELKDN* 924
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01547 923 Pfam Protein of unknown function (DUF3741) 218 262 IPR022212 -
Lapu1g01547 923 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 909 - -
Lapu1g01547 923 MobiDBLite consensus disorder prediction 142 168 - -
Lapu1g01547 923 MobiDBLite consensus disorder prediction 104 132 - -
Lapu1g01547 923 MobiDBLite consensus disorder prediction 309 330 - -
Lapu1g01547 923 MobiDBLite consensus disorder prediction 104 168 - -
Lapu1g01547 923 MobiDBLite consensus disorder prediction 667 700 - -
Lapu1g01547 923 MobiDBLite consensus disorder prediction 534 595 - -
Lapu1g01547 923 Pfam Domain of unknown function (DUF4378) 756 904 IPR025486 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu1g01547 Lapu-Chr1 28293901 28300768 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01547 1 892 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.188 5.32e-103 338
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01547 - - gmx:100783243 1455.65
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01547 1 28293901 28300768 Lapu1g01547 1 28293901 28300768 ECH
Lapu1g01547 1 28293901 28300768 Lapu10g00122 10 2897885 2904197 PCT