Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g01547 | ATGGCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGCTTTATCAGTATATTTGATTTTCGTCATGCTCGCTTTACTCGAAAGTTGATAGCAGATAAGAGACATGGAAGCAAGCATGCTTTTGGTGCTGCACTTACTAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATGAAAACTATGAAGGCAATTTTGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATTATTGACCAGGATGAAGTAAAGGATCAAGCTAACAGGGAAGGAGAATCAAAGCAATCCAGATCAGGGCGTGACGACCCCCCAAAGACAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAGCCGTGATTTGAGTTCAGATGCAACATTGAAATCAGAATTTTCACATAAGCAGCATTCAAGGGAACAGTCAAAAGATACTGTAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGCATGACAATGATGTCAAAATGGATGCTCAGTCAAACCAAAAGAATGTTATGTCTGAAAACCTTGCTATTGCAATCCATGAACTTGTGAATCAGATGAGATTGAATGGGAATGATCTGCCTGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTCCTTAGACTTCTACAAGACCCAAATTCGCACTTGCTGAAATACATTCAGGAGTTGGAAAATGCTCAAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGGCTCCAACTGCTCTGAACTAGAACTTGTTAATCTGAAACAAACTAGGGAGAGTGCCAACCGCAAGCATCGTAACTTTTTCAGGAAAAGGGGGAAGTCTCAATCAAAAGATCCAACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACAGGCATGCAAATTTCTGAAAGTGAAAACAACCTTGCCTCATCGCTAGATTCTGCCCATTACAAAGGTCCATCTGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAGATAAAAAGGAAACTGAAACATGCCATGGGAAAGGAGAGGCATGGAAACCCTGAAGTAATCCCACGAAAACTCCCCGTTGAACGTCAAAATAAGTTGCCAAGAGGCAAATGCAAAGATAATGCTGGAATGAAATCTCCTAATAAAGATCATTTCTTCATTGAAAAGATTGCGAGACCTATGTTTGATGTTGTGAAAGGAAACAAGACTGATACATTGAAAGACTCTGAATTGAATCTAGAACAAGAAAGTGGTATTCCCAAGCTAAGTGCTTCTAACATATACGTTGAGGCAAGGAAACATCTGTGTGAGATGCTAGATAATGCTGATGAAAACACAAACATTTCAAGCAGGAAGATTCCCAAAACCCTTGGGAGAATACTTTCTCTTCCCGAGTACAACTTTTCACCTGTGGAAAGTCCTGGAAGGGATTTGGAGCATCATTCTGTGACAGCACAGGCAAGATTTTCATCCACAGGCAAAACTAGGGAAGTTAATAATGAGGATAATTCGTCCCCACAACCAGCAACCTCTATTGGTATTCCAGATCAGGAAACTAACAATTCAGAAAAGCAGTCAAGCATTTCTGATGAAATCTCTAATAATAAAGTACAAGAAATTAAGCCAGTTTCAAATTTCTCCCATAATGTTGGTCCTGTTGATACATCTGAAGTCTGTCGTCCTATTAGAGATGAGATAGTCACTGAAGGTAATGTTGAATCTGCAGAAGAGAAAAATGAATTGGAATCAGAGCCAAATGGCTTCGTCATAGGAAAGGACCAAAATTTTGATATCTCAGAAATTCCTGATGGTGCAAGATGTTCTGGATGTTTGAATCAGGATGAGTATATAACTGAAGAGAACCAACTATCATCTCTACCGTCATCTCCTCACTCTTCGATCACTAAGAAAAGTGAAGAGCTAGAATGTGGGCCAGAGTTATCTGGGCGACCGAGCCCTGTGTCTGTTCTTGATACATCATTTTCAGATGATGACTCTGGACACTCCAGATGTCAACCTGTTAAATTACCAGTACAACCTCTACAACTTCAATTTGAAGAACAGGACTCTTCACCTGCAGAACAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATACATGACTACATCAAAGTTGTCTTGCATGCCTCTGGTTTGACAAGAGAGCAGTTGTTGGTGAAATGCTTTACCTCTGACAAAATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTCTCGAACCTGCTTTGCCATGACCAGAAGCTCCTATTTGACTCTATCAATGAAGTTCTCACGGAGGTTTGTCAGCATTACTTTGGGGTCTCACCTTGTGTTTCATTAGTAAATCCTAGCATGAGGCCAGCTCCAACTATGAGAAGGGTTACTTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTGCTTCCCTTGCCCCCACCACGCACTTTAGAGCAGATTGTTAGGAAAGACATGGCAAGAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAACAATTGGTTTTGAAATGGAAGAGGCCATTCTTACTGAACTGATGGAAGACACAATTTTGAGCCTTGTGAGTGAAAGTTCAGTGCTTCAATTTGAGTTGAAGGACAATTAG | 2772 | 0.4019 | MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAFGAALTKNKFEVLSNLDENYEGNFDRGESKRLTLTTDAEKLSVKKLIEEEMIIDQDEVKDQANREGESKQSRSGRDDPPKTDSKRKKKSRKKSRDLSSDATLKSEFSHKQHSREQSKDTVDLDKIMDDFCHVEAACSMMHDNDVKMDAQSNQKNVMSENLAIAIHELVNQMRLNGNDLPEDGQFLSSRELMEALQVISSDKQLFLRLLQDPNSHLLKYIQELENAQGRDGKECSSLTGSNCSELELVNLKQTRESANRKHRNFFRKRGKSQSKDPTNENGKTEFSNRIVILKPALTGMQISESENNLASSLDSAHYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQNKLPRGKCKDNAGMKSPNKDHFFIEKIARPMFDVVKGNKTDTLKDSELNLEQESGIPKLSASNIYVEARKHLCEMLDNADENTNISSRKIPKTLGRILSLPEYNFSPVESPGRDLEHHSVTAQARFSSTGKTREVNNEDNSSPQPATSIGIPDQETNNSEKQSSISDEISNNKVQEIKPVSNFSHNVGPVDTSEVCRPIRDEIVTEGNVESAEEKNELESEPNGFVIGKDQNFDISEIPDGARCSGCLNQDEYITEENQLSSLPSSPHSSITKKSEELECGPELSGRPSPVSVLDTSFSDDDSGHSRCQPVKLPVQPLQLQFEEQDSSPAEQFDTGKYSFGENELIHDYIKVVLHASGLTREQLLVKCFTSDKILDPSLFDQVEFFSNLLCHDQKLLFDSINEVLTEVCQHYFGVSPCVSLVNPSMRPAPTMRRVTFKVWEGVCWHVLPLPPPRTLEQIVRKDMARRGTWMDLELDAETIGFEMEEAILTELMEDTILSLVSESSVLQFELKDN* | 924 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g01547 | 923 | Pfam | Protein of unknown function (DUF3741) | 218 | 262 | IPR022212 | - | |
Lapu1g01547 | 923 | PANTHER | ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED | 1 | 909 | - | - | |
Lapu1g01547 | 923 | MobiDBLite | consensus disorder prediction | 142 | 168 | - | - | |
Lapu1g01547 | 923 | MobiDBLite | consensus disorder prediction | 104 | 132 | - | - | |
Lapu1g01547 | 923 | MobiDBLite | consensus disorder prediction | 309 | 330 | - | - | |
Lapu1g01547 | 923 | MobiDBLite | consensus disorder prediction | 104 | 168 | - | - | |
Lapu1g01547 | 923 | MobiDBLite | consensus disorder prediction | 667 | 700 | - | - | |
Lapu1g01547 | 923 | MobiDBLite | consensus disorder prediction | 534 | 595 | - | - | |
Lapu1g01547 | 923 | Pfam | Domain of unknown function (DUF4378) | 756 | 904 | IPR025486 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g01547 | Lapu-Chr1 | 28293901 | 28300768 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g01547 | 1 | 892 | TRM (TON1 Recruiting Motif) Superfamily | AT4G00440 | 33.188 | 5.32e-103 | 338 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g01547 | - | - | gmx:100783243 | 1455.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu1g01547 | 1 | 28293901 | 28300768 | Lapu1g01547 | 1 | 28293901 | 28300768 | ECH | |
Lapu1g01547 | 1 | 28293901 | 28300768 | Lapu10g00122 | 10 | 2897885 | 2904197 | PCT |