Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01542 ATGGATACAGACAAAACCTCACAACTCCCAAGAAGAATGACAAGGTCTTCAGCTTCATCTCCCACATCCTCTTCAAATAATGTAATTGCAGCAAAAGTAAATAGCCTTGAACCACTAACAATCAACGACCTTTTAGTTGGAGGAGATCCAATCAGTCTAGATGACATAATTTCTGACTTCCCTGGTAGAAGAAGCCAGATTCTTGAGATTGTGCGTCTTTTAGGACCTTTGAATTCACCAATGCTTCCTTTCTTTGTATATGGAGGTCCTTCTACTGGAAAAACCAGTATCATTCTTCAATTGTTCAGGCATATCAACAGGCCTCTAGTTTATTCTAGTTGTAGGACATGTTATAACCAGGGAATCTTGTTTGAATCTATCCTAAATCAGTTATTTCTCCATAGAAAAAATGCTGCCAATGGTTTTGCAAATGCAAAACGCTGTGAAAGACCGTCTGATTTTGTCAACTTTCTTCGGGAAGCATTGACCAATGTTATAAACAATCTCAAAGAGAAGTCAGAGAAGTTGGTCTCAAATAAGATGACACAAGAGAAATTTGGAAACATGATATATTTGGTGTTTGACAATTTTCATCTTGTTAGGGAATGGGATAAGAGTTCTACTATATTGCCCTTGCTGTTCAATCTCTATGATATGCTAAAGATGCCTGAGGTGGGTTTGATTTTTATCAGCAGTACATCCCCGGACACATTTTACTCTAACATGGGCTATGTAGAACCTATCCCCATTTACTTTCCTGATTATACAGAAGGTGATATTCGTCAAATATTATTAAGAAACCAAGTGAACCAGAAGCTTTATTCCTCATTTCTCGATGTAGCTCTGAAGTCTTTTTATGGAATTACTAAGCAAGTTGGTGATTTGTCTGCTGCCTTAAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAAAGGGAGTTGCTCCTGATCAACAGATGAGGCGAAGGCTGCTTGCTCATATCAACCCTCATATTGGCCCCTCTTTGAATGAGATATTTAAGGTTTCATCCCTTTCTTCTGCTGAAGTGGAGACCCGGAAAGAGGAAAAGTGGAAGGGAAATCCCAGGAGATTGGAGCAATCCGAAGAACTTGGCAGTCTTGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTGATTTCAGCATTCCTTGCCTCCAGAAACCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGCTCTGATAATCGAAAGCGGAAGAGGAAGCCTTCTGAGAAAGCGATGGAACGGAAGGAAACTTTAGAAGAGGAGCTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTATTAGCCATCTTTCACTGCCTTGTATCAGTCTCAGAAGATGAGGAAGAACCAAACAATGATGGATTTGGAGTTGAAGGTGGCAATGGTGGACTGATGTCCGACGTTCTTTTGCAGCTGTCTAGTCTCTGCAATGCTAATTTTATATTCAAAGGTAGAAGCTGTCCAATTGAGGGCTCAACCCGGTATCGATCAACCATTTCCGAAGATCTGGCTTTGAAGGTTGCGAGGAGCCTTAAGTTCCCATTATCAAAGTATTTGTATAGAAATTAG 1620 0.3994 MDTDKTSQLPRRMTRSSASSPTSSSNNVIAAKVNSLEPLTINDLLVGGDPISLDDIISDFPGRRSQILEIVRLLGPLNSPMLPFFVYGGPSTGKTSIILQLFRHINRPLVYSSCRTCYNQGILFESILNQLFLHRKNAANGFANAKRCERPSDFVNFLREALTNVINNLKEKSEKLVSNKMTQEKFGNMIYLVFDNFHLVREWDKSSTILPLLFNLYDMLKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEGDIRQILLRNQVNQKLYSSFLDVALKSFYGITKQVGDLSAALKPLYEKYCEPLSDKGKGVAPDQQMRRRLLAHINPHIGPSLNEIFKVSSLSSAEVETRKEEKWKGNPRRLEQSEELGSLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKAMERKETLEEELLMKGPGTFPLERLLAIFHCLVSVSEDEEEPNNDGFGVEGGNGGLMSDVLLQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01542 539 Gene3D - 60 241 IPR027417 -
Lapu1g01542 539 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 538 IPR020796 GO:0000808|GO:0005634|GO:0006260
Lapu1g01542 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 272 IPR027417 -
Lapu1g01542 539 MobiDBLite consensus disorder prediction 410 432 - -
Lapu1g01542 539 Coils Coil 155 179 - -
Lapu1g01542 539 MobiDBLite consensus disorder prediction 404 432 - -
Lapu1g01542 539 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 536 IPR047088 -
Lapu1g01542 539 Pfam AAA ATPase domain 60 216 IPR041664 -
Lapu1g01542 539 MobiDBLite consensus disorder prediction 1 25 - -
Lapu1g01542 539 FunFam Origin of replication complex subunit 5 60 241 - -
Lapu1g01542 539 MobiDBLite consensus disorder prediction 10 25 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01542 4 538 Core DNA Replication Machinery Family AT4G29910 58.041 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01542 K02607 - gmx:100782175 934.48