Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01505 ATGGAAAGCCAAGACCCACCAAACCCTCCACCCCAAAACAACCCTTTTCTCTTCACGCCTGTGCTGCAAAACCCTTTGGACCCTCAAGAGCAAGGGCTATGTGACTTTGACTGGGGTAACCTTTTCTCTGCCCAAAACAGCTTCTTGCTGCTTAATGGGGATGCCAAGGAAACTATTCAATGTGCTTCTTCTTCCTCTTCCTCTTTTATGGCTCAAAATAAGGTAATTTGCGAGGAGGAAAATGGAAACAAGGAGAAAATGAAAGTTGGGAGGGTGAAGAAAACAACACGAGTGCCAAGGTTTGCTTTTCAAACCAGAAGTGCAGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAATCTGTGAAGAATAGCAAATATCCCAGTCTTTTCCTAATGGTTTCACTATGTTTTGCATTCACTCATCATTAG 444 0.4279 MESQDPPNPPPQNNPFLFTPVLQNPLDPQEQGLCDFDWGNLFSAQNSFLLLNGDAKETIQCASSSSSSFMAQNKVICEEENGNKEKMKVGRVKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKSVKNSKYPSLFLMVSLCFAFTHH* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01505 147 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 132 IPR044810 GO:0003700
Lapu1g01505 147 SMART WRKY_cls 112 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01505 147 Gene3D WRKY domain 99 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01505 147 ProSiteProfiles WRKY domain profile. 107 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g01505 147 SUPERFAMILY WRKY DNA-binding domain 105 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g01505 147 Pfam WRKY DNA -binding domain 113 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01505 Lapu-Chr1 27828260 27828802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01505 68 135 WRKY Transcription Factor Family AT5G41570 50.000 1.01e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g01505 WRKY 2.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01505 - - gmx:100127398 200.675