Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01496 ATGGAGCCTAAGCCTAACTTTGTGTTTCCACTTCTATTCATGCTCCTCATTACTCACTGGTTTCTATTGGCTCATCATGGCAGTGCTGCTGAGAGTTCCACATATATAGTCCACATGGACAGATCCCTTTTTCCCAATGTCTTTGCAACCCATCATGATTGGTTTGAATCCACCATTGAGTCCATAAAATCAGCAACACTAGGTCACTCGTTCAAGCAATCACAGAAACTGATAGTGTACTCCTATAACCATGCCATGTATGGTTTTAGTGCAGTACTAAGCCCAGAAGAGGTAGAGGCTGTTAAGAACTCCCATGGTTTTGTTGCAGCATATCCAGACATAAATGTCACCATAGACACCACTCACACTTCTGAATTTCTCTCCCTAGACTCTTCCAGGGGCTTAGGGCACGCCTCAAATTTTGGGGAGAATGTCATTGTGGGTGTTATTGACACTGGTGTGTGGCCTGAGAGTGAAAGCTTCAAAGATGATTACATGACCAAGAAAATTCCAAACAAATGGAAAGGGACCTGTGAGGAAGGGCAAGAATTCAACACTTCCATGTGTAACTTCAAACTGATTGGAGCTAGATATTTCAACAAAGGTTTGATTGCTGCAAAACCCAAGGTTAAAATCAGCATGGACTCAGCTAGAGATACTGAGGGTCATGGAACTCACACATCTTCAACAGTTGCTGGCAACTATGTCAGAGGCGCCTCTTACTTTGGCTATGCCAAAGGGGTGGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGACGAGGGTCGTTACGCCTCTGATGTTTTGGCTGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCCATCTCTATGGGGTTTGATGATGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTTGTTTCATCCTCTGCAGGTAACAATGGTCCTGATCTTGGTACTTTGCACAATGGAATACCCTGGCTTCTGACCGTGGCTGCAGGCACCATAGACCGCTTATTTGGTACTCTAATTCTTGGAAATGGCCGAACCATTAGAGGTTGGACCTTGTTTCCAGCAAATGCCTTGGTGGAAAATCTTCCACTTATCTACAATAAGAATATATCAGCATGTAACTCAGTCAAGTTGTTATCCAAAGTGGCAACAGAAGGGATCATTATATGTGACTTACAGCCAGAGCCCGAGTTAATGTATGAGCAAATGCGGGTTGTTAGTGAAGCTAGTTTATCACGGGCAGTGTTTTTTGTTGATGGTTCTTTGTTAGATGACACAGGAACTCTCACCTCTCCAAGTATTGTAATCAGTGCAAAGGATGCACCATCTGTGATCAAGTATGCAAAAAGCCATAGGAAGCCAACAGCCAGTATCAAATTTCAGCAAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTGCTGGTTACTCTTCAAGAGGTCCTTCACCTAGCTACCCTGGGGTCTTGAAGCCTGACATAATGGCACCTGGCTCTAATGTCCTTGCTGCCTTCATTCCTGATTCTCCAGCAGCTACAATTGGCAACAATGTGGTCTTACCTAGTGACTACATTTTGCTGTCTGGAACATCCATGGCCTGCCCTCATGCTTCTGGTGTTGCTGCTCTTCTGAAAGCCGCACACCCCAAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTAGATAATACACATAATCCAATTAGAGACCATGGTTATCCTTATCAATATGCTTCCCCTCTTGCCATGGGAGCTGGTCAAATTGACCCTAACAAAGCACTTGACCCAGGTTTGATATATGATGCCAGCCCACAGGACTATATTAATCTCCTTTGTGCTTTGAAGTACACAAAAAAGCAAATCTTAGCCATTACAAGATCAAGATCTTACAGTTGTGCAAAACCATCCTCTGATCTTAACTACCCTTCATTTATAGCTATCTATAGCAACAAAACAATGTCAGTTGTCCACAAATTTAGGAGGACAGTGACCAATGTTGGAGTTGGTGCTGCAACATACAGGGCCAAGGTGACACAACCTAAGGGCTCTGTGGTGTCAGTGTCACCTGAGACATTAACATTTAGACATAAAAATGAGAAGCTGAGCTACAGTGTTATAATAAAGTACAGCAAGTACAAAAAGGAAGATATCTCATATGGGGATCTTGTTTGGATTGAAGATGGTGGAGCACACAGTGTTAGGAGCCCCATTGTAGTGGCACCAAGTGGAATTGTTTGA 2301 0.4394 MEPKPNFVFPLLFMLLITHWFLLAHHGSAAESSTYIVHMDRSLFPNVFATHHDWFESTIESIKSATLGHSFKQSQKLIVYSYNHAMYGFSAVLSPEEVEAVKNSHGFVAAYPDINVTIDTTHTSEFLSLDSSRGLGHASNFGENVIVGVIDTGVWPESESFKDDYMTKKIPNKWKGTCEEGQEFNTSMCNFKLIGARYFNKGLIAAKPKVKISMDSARDTEGHGTHTSSTVAGNYVRGASYFGYAKGVARGIAPRARLAMYKVLWDEGRYASDVLAGMDQAIADGVDVISISMGFDDVPLYEDPIAIASFAAMEKGVVVSSSAGNNGPDLGTLHNGIPWLLTVAAGTIDRLFGTLILGNGRTIRGWTLFPANALVENLPLIYNKNISACNSVKLLSKVATEGIIICDLQPEPELMYEQMRVVSEASLSRAVFFVDGSLLDDTGTLTSPSIVISAKDAPSVIKYAKSHRKPTASIKFQQTFVGIKPAPAVAGYSSRGPSPSYPGVLKPDIMAPGSNVLAAFIPDSPAATIGNNVVLPSDYILLSGTSMACPHASGVAALLKAAHPKWSAAAIRSALVTTASPLDNTHNPIRDHGYPYQYASPLAMGAGQIDPNKALDPGLIYDASPQDYINLLCALKYTKKQILAITRSRSYSCAKPSSDLNYPSFIAIYSNKTMSVVHKFRRTVTNVGVGAATYRAKVTQPKGSVVSVSPETLTFRHKNEKLSYSVIIKYSKYKKEDISYGDLVWIEDGGAHSVRSPIVVAPSGIV* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01496 766 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lapu1g01496 766 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Lapu1g01496 766 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lapu1g01496 766 Pfam Subtilase family 142 584 IPR000209 GO:0006508|GO:0008236
Lapu1g01496 766 Pfam Fibronectin type-III domain 659 760 IPR041469 -
Lapu1g01496 766 Gene3D Peptidase S8/S53 domain 144 628 IPR036852 GO:0004252|GO:0006508
Lapu1g01496 766 CDD Peptidases_S8_3 116 580 IPR034197 -
Lapu1g01496 766 Gene3D - 632 762 - -
Lapu1g01496 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 760 IPR045051 -
Lapu1g01496 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Lapu1g01496 766 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Lapu1g01496 766 ProSiteProfiles Serine proteases, subtilase domain profile. 123 615 - -
Lapu1g01496 766 CDD PA_subtilisin_like 354 474 - -
Lapu1g01496 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 118 IPR037045 -
Lapu1g01496 766 FunFam Subtilisin-like protease SBT1.9 24 119 - -
Lapu1g01496 766 Gene3D - 349 481 - -
Lapu1g01496 766 FunFam Subtilisin-like protease SBT1.5 144 356 - -
Lapu1g01496 766 SUPERFAMILY Subtilisin-like 120 619 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01496 Lapu-Chr1 27732661 27734997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01496 30 763 Subtilisin-like Serine Gene Family AT5G67090 43.161 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01496 - - gmx:100779169 1285.78