Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01494 ATGGAGTTTCATCCTTACCTTTGCATTCTCCACATAATCCTGTTCTTACGTATGTTTCCTGAAGCAGCTAACTGTCAACAAGCATACCTCAACAGCACTGTCTATGATTGCTCTGAGAACCCTTCTGCACCAAAAGGATACCTCTGCAATGGCCTTCAAAAGTCATGCACTTCCTTCTTAGTTTTCAGGTCCAAATCTCCCTCTGACAACCCTGTAAGCATTGCTTACCTTCTTGGCTCTGAAGCATCTACCATAGCCTCAATCAACAACATCTCAAGAGATGACAAGATTCCTTCCTATAAGTCAATCATTGTTCCTGTATTCTGTTCATGTTCTGGAAATATCTACCAGCACAATACACCTTATACTGCCACCAAGAATGACACCTACTTCAAGTTGGTAAAAGAAACTTACCAAGGCCTCACCACCTGCCAGGCACTGATGGGTCAGAATTACTATGCCTCTGGTGACATTAGAGTTGGCGCTGAGCTCACAGTTCCAGTAGTATGTGCTTGTCCCACTGAAAATCAGACAGCAAGAGGGGTCACTTCCTTGCTGGTTTACTCAGTGAATAATGGTGATACCATCAAGTCCATTGGCGAGGCTTTTGGTGTTGATGAACAAAGTATGCTAGAGGCCAATGGGTTGTCAGTTCCGCCAAGTGAAGAGAACAACATAATCATCTATGCCACGACTCCTATCTTGGTTCCTCTTAGAGGGAAGAATTGCAAAGAGGACCCGGATAGTTTCTATTGTACTTGCTCCCAGGGAAGGGTTGAGGATGGAACCTTCATGGGGTTCCAATGTAATGAATCTGATGATGAAGATTTTCCTATCAAATTGGTTGCTTCGTTAGGTGTTGGAATTGGAGCAGGCTTTCTGTGTTTGTTTCTTTTGGGGTACAAATCATATCAATATATTCAGAAAAAGAGAGAAAGTATTCGTAAGGAAAGCCTATTCAGACTAAATGGTGGGTACTTGTTACAAGAGAAGCTTTCTTTTTATGGAAATGGAGAAATGGCAAAGCTGTTTAAAGCTGACGAGCTACAGAAAGCAACAGATAACTATAACAGGAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACTGTGTATAAAGGAATGCTACCAGATGGAACCATAGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATAGAGACTTTTGTCAATGAAGTGGTGATTCTATCACAGATCAACCACAGGAACATTGTCAAACTCTTTGGTTGTTGTCTTGAAACAGAAACTCCTTTACTAGTCTATGAATTCATTCCCAGTGGAACACTCTCTCACCATATCCACAGGAGAGAGAATGAGCCCTCCCTTTCATGGGAAAGTCGACTTAGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATATATGCATTCTGCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCGAGATCAGTGCCACAAGATAAGACTCACTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAGTTTTCAGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTCGTGGAGCTCATAAGCGGGAGAAAGCCAATTTCGTTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCACAGTTTCTTTCTCTGATGAAGGAGAACAAAGTTTATGAAATTTTAGATGGCAGGGTGGTTAAGGAAGCAAGGAAAGATGACATTCTTGCCATTGCAAACCTTGCAATGAGATGCTTGAGACTTAGTGGTAAGAAAAGACCAACAATGAAAGAGGTTTCACTGGAATTAGAAGCATTGAGAAAGGTGCAAGGTTCCTTAGAGATCAACCATGATCATGAGTACACAACTTGTGACATAGTTGAAGAATGCACAGATGAAAGCATGCCACTGTGCTTAGAACTAGATTCCACATCCTTTTAG 2010 0.4174 MEFHPYLCILHIILFLRMFPEAANCQQAYLNSTVYDCSENPSAPKGYLCNGLQKSCTSFLVFRSKSPSDNPVSIAYLLGSEASTIASINNISRDDKIPSYKSIIVPVFCSCSGNIYQHNTPYTATKNDTYFKLVKETYQGLTTCQALMGQNYYASGDIRVGAELTVPVVCACPTENQTARGVTSLLVYSVNNGDTIKSIGEAFGVDEQSMLEANGLSVPPSEENNIIIYATTPILVPLRGKNCKEDPDSFYCTCSQGRVEDGTFMGFQCNESDDEDFPIKLVASLGVGIGAGFLCLFLLGYKSYQYIQKKRESIRKESLFRLNGGYLLQEKLSFYGNGEMAKLFKADELQKATDNYNRSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEFIPSGTLSHHIHRRENEPSLSWESRLRIACEVAGAVAYMHSAASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELISGRKPISFLEEDEGQNLIAQFLSLMKENKVYEILDGRVVKEARKDDILAIANLAMRCLRLSGKKRPTMKEVSLELEALRKVQGSLEINHDHEYTTCDIVEECTDESMPLCLELDSTSF* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01494 669 Gene3D Phosphorylase Kinase; domain 1 328 431 - -
Lapu1g01494 669 FunFam Wall-associated receptor kinase 2 327 431 - -
Lapu1g01494 669 CDD STKc_IRAK 362 629 - -
Lapu1g01494 669 Pfam LysM domain 188 219 IPR018392 -
Lapu1g01494 669 SMART serkin_6 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01494 669 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Lapu1g01494 669 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01494 669 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 107 635 IPR045274 GO:0007166
Lapu1g01494 669 Gene3D Transferase(Phosphotransferase) domain 1 432 652 - -
Lapu1g01494 669 ProSiteProfiles Protein kinase domain profile. 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g01494 669 FunFam Wall-associated receptor kinase 2 432 648 - -
Lapu1g01494 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Lapu1g01494 669 SUPERFAMILY Protein kinase-like (PK-like) 340 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01494 Lapu-Chr1 27723716 27725954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01494 286 630 Receptor kinase-like Gene Family AT1G16130 59.078 9.94e-142 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lapu1g01494 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01494 - - vun:114186184 1227.62